Cryptomeria japonica (Japanese cedar): 131063892
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Entry
131063892 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131063892
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131063892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131063892
Membrane trafficking [BR:
cjf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131063892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
TPR_VPS8_2
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_1st
zf_RING_Vps8
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
131063892
NCBI-ProteinID:
XP_057853825
LinkDB
All DBs
Position
3:complement(272726783..272816261)
Genome browser
AA seq
2110 aa
AA seq
DB search
MASLSNEFDLDSFLELQSSDDDDNDLPALDRSLEEILKDSDDESSSDASENASNPSSYLF
RNPNFMQKTDENNTGRAEKDVEKTEGAEVCSSAGRDKIGHESGTSNDSNLNSDYEYGKLL
ENKDQQTKISDQGQSPSGKQTELKLNMNMKKSTFSDFSGRSLPFAASMPSSLLLARSPSL
TPMLGSVRPSPRPGEALAAAAKASRAVPSPHAAVLKNKMANSLSLKSLDTFELSNTSQKT
EEVEDELEKEYTTGSEGEISERVFQLDESSSTNQLQLVKSDEEMDEVIAVLDQKEGKFQP
RSEDEEFMVQKQRHTIQNQGEEVIDENVEDTSIEQRETGTGEGEGEGEGAGAEGEGKGGG
VPDNKSQVLWNDKGGIMSHENEQSSTLVDTDVDTSIETKSTKSSTIAMDDDHSAMHADFQ
ERRNTGKFFPDSTEISIDEKQTMVAEICTENIKLKVADDIVEEKAGKVESNRSARKVGKK
ASTSLKPLDLAEELEKRDASSGLHWQVGAAAQPMRLEGIRRGPPAIGHLQIDSTNSLSQV
LASQMFKRDHGSPQAVAVHINYIALGMSKGSVFVNPSKYSAQSPDVIDTKAFSLSSPIEK
SQAAVTSMCFNQQGDLLLVGYGNGCLTLWDLQRQTAAKVISGEHSSPIVHTLSLGQDPQN
ARQYKAISGDSKGVVLLHTFVVFPLLRRFSVTTQCLFDGQRTGTVLSMSALLVDESQNAT
SNAGQGGPSMSSNSLGSMMGGVVGGVVGGETGKKLFSDGTLSEETGGVVIFVTQQTALVV
RLTPSLEVYAKLPRPDGIREGAMPYTAWRRIPSYGSSSHKSNSNSSNNGNTDSESSGLTS
LQEGGLIKVSHDTEDLNNKASLLAIAWDRKVQVAQLVKSELQVRREWNLDSAALGVSWLD
EQILVILTSKGQLCLFTKEGMELDRSRLPIEDGGLESALIYHTYFVNSFGNPEKSYHNSM
AVRGAAIYLLGPSQLFRSRLLPWKERIQALQDAGDWMGALHLAMELYDGNAQGVIGLPKT
LDAMREAIMPFLLQLLSAYVDEAFSYISLAFSNQHGKTESDSEGKSQKDTVHVQIKEQFA
RVGGVAIEFCVHIKQTDVLFNSVFSKFVGVQHGGTFLELLEPYILKDMLGGLPPEVMQAL
VEHYSRKGWLQRIEQCVLHMDIASLDFNQVARLCREHGLYSALIYLFNRGLDDFKAPLEE
LLAVAQDQKRPHAQAFGYKMLVYLKYCFLGLAFPPGHGNLPPDRLPSLRTDLMQFLLERT
STGRSQFKINSEFSSRSYPNLCYLLWLDTEATLEVLNCAFLEDEHLKMRETDLSSLNLYG
VKPDNQKLKPALHEIPSNEMKASDYEFPLVQTLIDALTEILEMSFSGTLKLLNEEILGSK
VHEKAWPSRKDIGSLLEFIACYVACRHATVSRVMLTRIIEYLASKNEFSMGDTLDDSNQD
ISRRREKLMFALLKGVPESEWDSEYALELAQNARFYQVSSLIYMLKGQYIPALDSYIKDV
GEPIYAFAFISNMLRQLADVDSLTFTDFRSAVQRRIPKLIQLSREATFLLVLEHYYKESQ
EIISELSPHPNLLFLYLKTMIDVHSHGVPKYPSAPLDNNLNISLFGLKGLDQSKELKDYL
DRISKLPEYVQRHGIEVTDEMAELYLELLCQFEPKSVLKFLESFENYRLEHCLRLCQDYG
VTDAAAFLLERVGDVGSALSLTISDVTERIREMDSAVASIYKKSVSSISSEDKQLNVLVM
MMPEVGAVHAILFSAVGLCQRNTLRLDPQESESLWFRLLDTFSEPSRDLYYHEKYFKDEK
ENYKKSHKEDLNLKVSLRWKVINVGDSAYHLRRVFAHFIGEIIEGMMGYVPLPVIMSKLL
SDNGNQEFGDFKATILGLLGTYGYERTILDTAKNLLEDDAYYNIHMLRKGASHAYAPASS
CCCICGRTLDRESFGSSIYIFHCGHVAHFQCETQDSVAITKDSMGGCPICLPKKRSSSVR
KKMIEAQKEIIEEASNGVQGQASSSKSLYENALTERPYGLHPQSRFELLNNLQKGQNSLD
LGLLPNLRLAPPLVYHDRKAHSTSPASKEEASNEKLKNVHLIRAQRTKSSSPFQFPLKSS
IFGNDKNRKH
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactgtccaacgaattcgatctggattcctttctggaattgcaaagcagcgac
gatgatgacaatgaccttcctgcactcgatcgcagcctcgaagaaatcttgaaggactct
gatgacgagtcttcttcagatgcctctgagaatgcttcaaaccctagctcttatttgttt
agaaaccctaattttatgcagaaaaccgatgaaaataacacaggccgggcagaaaaagac
gtggagaaaacagagggcgctgaagtttgttcttccgcaggcagagataaaattggacat
gaatcaggtacttctaatgactctaacttaaattcggactatgagtatggcaagctccta
gagaacaaggaccagcaaacaaaaatttctgatcaagggcaatctccgtctgggaaacag
acggagttgaaactgaacatgaacatgaagaagtcgacgttttcggatttttccggcagg
tctcttccatttgctgcttctatgccatcttctttgcttttagctcgatccccttcatta
actcccatgcttggcagtgtaaggcctagccctaggccaggtgaggcgcttgctgcagct
gccaaagcatctcgagctgttcccagcccccatgctgccgtgttaaagaataagatggcc
aattctctctctctaaagagccttgacacttttgaattatctaatactagccaaaaaacg
gaagaagtagaagatgaattagaaaaggagtatactactggttctgaaggggagatttcg
gaaagagtttttcaattggatgagagttcaagtactaatcaattacagcttgttaaatcc
gacgaagaaatggatgaagtgattgctgttctcgatcaaaaagagggaaaattccagcca
aggtcagaggatgaggaatttatggttcaaaagcaacgtcatacaatacaaaatcaggga
gaagaagttatagatgaaaatgttgaagatacaagtatagaacaacgcgaaacagggacc
ggagaaggagaaggagaaggagaaggagcaggagcagaaggagaaggaaaaggaggaggg
gtgcctgacaacaaatcacaggttctatggaatgataaaggtggcattatgtcacatgag
aatgagcaaagttcaacattggtagacactgatgttgatacttctatagaaactaaaagc
accaaatccagcacaattgccatggacgatgatcatagtgcgatgcatgctgattttcaa
gaaagaagaaacactggtaagttttttccagattcaacagagataagtattgatgaaaaa
cagacaatggtggctgagatatgcacagaaaatataaagttaaaggttgctgatgacatt
gtcgaggagaaggcaggcaaggtagagtctaaccgttctgcaagaaaggtgggaaaaaag
gccagtacttctcttaagccattggatttggcagaagaactcgagaaaagagatgcatct
tcaggattgcattggcaagtgggagctgcagctcaacctatgagacttgagggtattcga
agaggacctccagcaataggtcatctacagattgactcaacaaactctctttcacaggtt
cttgcctcgcaaatgttcaagcgcgatcatggttctccacaggctgtagctgttcatatt
aattatattgctttgggtatgtccaaggggtctgtttttgtaaatcctagcaagtattcc
gcccaaagtcctgacgttattgataccaaggcgtttagtttaagttctccaattgaaaaa
tctcaggcagctgtcacctcaatgtgttttaatcagcaaggagacctcctcctagtaggc
tatggcaatggttgtctcactctttgggatttgcagaggcaaacagcagccaaagttatt
tcaggggagcactcttcaccaattgtacacacattatccctaggacaagatccgcaaaat
gcacggcaatataaagctatcagtggtgattctaaaggagttgttcttctgcatactttt
gttgtttttcctttattgcgacggttttctgttacaacacagtgcctttttgatggtcaa
cgcactggaacagtcttgtccatgtctgcacttctggtcgatgaatctcaaaatgctact
tcaaatgctggtcaaggtggcccttcaatgtcttctaatagtctaggtagcatgatggga
ggtgttgttgggggagttgtagggggagagacaggaaagaaacttttcagtgacggtact
ttatcagaagaaactggaggtgtagttatatttgtcacacagcagacagctctggtggta
cgcttgactccctctttggaggtctatgcaaagctcccaagacctgatggcatccgtgag
ggtgccatgccttacacagcatggaggcgtattcccagttatggatcctcaagccataaa
agcaatagtaacagttcgaacaatggaaatacagattcagagagttctgggttgacatca
ttgcaagaaggtggattaataaaggtttcccatgacactgaagacttgaataataaggca
tctttgcttgcaattgcatgggatagaaaggtccaagtggctcagttagtgaagtcagag
ctacaggtgcggagagagtggaatcttgatagtgcagcactaggagtatcatggttggat
gagcagatattagttattctcacttcaaaaggtcagttgtgtttgtttacaaaagaagga
atggaactggaccgatctaggttacccattgaggatggtggtctagaatctgctcttata
tatcacacatactttgttaattcatttggaaatcctgagaagtcttatcacaactctatg
gctgtcagaggagcagccatatatttattgggaccttcacagcttttccgatctcgtttg
ttaccttggaaggaacgaattcaggctctccaagatgcgggtgattggatgggtgccctc
catttggcaatggagctttatgatggcaatgcacaaggtgtcattggccttccaaagaca
ctggatgccatgcgggaggctataatgccctttcttctgcagctgctctctgcttatgta
gatgaagctttctcttatatctcattggcctttagcaaccaacatggaaaaacggaatca
gatagtgaaggcaaaagccaaaaggacactgtacatgtacaaattaaagaacagtttgca
cgagtaggaggtgtggctatagagttttgtgtgcacataaagcagactgatgtgctgttc
aacagtgttttttccaaatttgtaggagttcaacatggaggtacatttttagaactgttg
gagccatatatattaaaggatatgcttggtggtctacctcctgaggtaatgcaagcacta
gtggaacactatagcagaaaaggatggctgcagcgaattgaacaatgtgttctgcacatg
gacattgcttctttggatttcaatcaggtggcaaggttatgtagagagcatggactttat
agtgcattgatatacctattcaataggggtttggatgatttcaaggcacccttggaggaa
ttgttggcagttgctcaggaccagaaaagacctcatgcacaagcttttgggtacaaaatg
ctggtttatctaaagtattgcttcttgggcttggcattccctcctgggcatggtaacctt
cctcctgatcgtctaccatcattgagaactgacttaatgcagtttcttttggaaagaaca
agcactgggcgatcacaatttaaaataaactccgagttttcaagtcgatcatatccaaac
ctttgttatctcttgtggttggatactgaagctactcttgaagtcttgaattgtgccttt
ctcgaagatgagcacttgaaaatgagagagactgatctttcttcattgaatttgtatgga
gttaaacctgataatcagaaattaaagcctgcattgcacgagattccatcaaatgaaatg
aaagcttctgattatgaatttcctctagttcaaacgttgattgatgcattgacagagatt
cttgaaatgagcttttctggaactttgaagcttcttaatgaagaaatacttggcagtaaa
gtacatgaaaaggcctggccctcaagaaaagatattggtagtttactggagttcattgca
tgctatgttgcatgcagacatgccactgtgtcaagggtcatgctgactcgcatcattgaa
tacttggcttctaaaaatgagttttccatgggagatactttagatgattccaatcaagat
atctcaaggcggagagaaaaactaatgtttgcacttttaaaaggtgtcccagagtcagag
tgggactctgaatatgctttggaacttgctcagaatgctcggttctatcaggtatcaagc
cttatatacatgctaaaggggcagtatattccagcattggatagctatataaaagatgtc
ggtgaaccaatatatgcatttgcttttatcagcaatatgttgagacagttggcagatgtt
gatagcttgacctttacagatttccgctctgcagtgcaaagacgtatcccaaaacttatt
caactaagcagagaagcaacctttctcttggtattggaacattattacaaggaaagtcaa
gagataatatctgaactcagtccgcatccaaatttactttttttatatttaaagaccatg
atcgatgttcattcacacggtgtaccaaagtacccttcagcaccactagataacaatttg
aatatctctctttttgggttgaaaggattggatcagtccaaggaacttaaagattatctg
gacagaatttctaaattaccagaatatgtccagcgtcatggcattgaagtaactgatgag
atggcagagctttatcttgagttgctgtgccaatttgagccaaagtcagttctgaagttc
ctagagagttttgaaaattacaggctggagcactgcttgagattgtgccaagactatgga
gttacagatgcagctgcattcttactggaacgtgtgggagatgttggtagtgctctatcg
ctcacaatctctgatgtaactgagagaatacgagaaatggatagtgcagtggcaagcata
tacaaaaagtctgtgtctagtatttcttctgaggataagcagctcaatgtgctcgtgatg
atgatgccagaggttggtgcagtccatgcaattctgttttcagcggttggtctttgtcaa
cgtaacactttgaggctagatcctcaagaatcggagtctctctggttccgtcttcttgat
acgtttagtgaaccttcacgggatttgtactaccatgaaaagtatttcaaagatgaaaaa
gaaaattacaaaaaatctcataaagaggatcttaatttaaaagtctcactgagatggaag
gtcataaatgtgggtgattctgcataccacttgcgaagggtatttgcacatttcatagga
gaaattattgaagggatgatgggttatgtgcccttgccagttatcatgagcaagcttcta
tcagataatggaaaccaagaatttggggacttcaaggcaaccattctgggactgttagga
acatacggatatgaacggacaattctggacactgcaaaaaatctattagaagatgatgca
tactataatatacatatgctcaggaagggtgcatcacatgcatatgcaccggcaagctcc
tgctgctgtatttgtggtcggacattggatagagagtcttttggctcaagcatttatatt
tttcattgtggtcatgtggcccatttccaatgtgaaactcaggattcagtagcaattaca
aaggattctatgggaggatgtcctatttgtttgccaaagaaaagatcgtcttcagttaga
aagaagatgattgaagcacagaaagaaattatagaagaagctagtaacggtgtacaaggc
caagcttctagttccaaatctttatatgaaaatgcactgacagaaaggccctatgggctt
catccccaatcacggtttgagctgttgaacaatctacaaaaaggccaaaattcacttgat
ttaggtctgctacccaatttgaggttagcaccacctttagtgtatcatgatcgcaaggct
cacagcaccagcccagctagcaaagaggaggccagcaatgaaaaactgaagaatgtacac
cttataagagcacaaagaacaaaaagttcttcaccattccaatttcctttgaaatcaagc
atttttggtaatgataaaaacaggaagcattaa
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