KEGG   Cryptomeria japonica (Japanese cedar): 131064458
Entry
131064458         CDS       T10556                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131064458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131064458
   03041 Spliceosome [BR:cjf03041]
    131064458
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131064458
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131064458
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131064458
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 131064458
NCBI-ProteinID: XP_057854588
LinkDB
Position
2:397939533..397951206
AA seq 437 aa
MDAKKRKVEENGGTGEVEVAVAAEDVGKMIESFSREQLVEIVQEAGAKHLDVLEAIRGIA
DKDPALRKLFVRGLGWDTTTESLKSLFSHFGELEEGVVIMDKNTGKSKGYGFVTFKHMDG
ALNALKEPSKKIDGRMTVSQLASTGSSQQHPQPSADVSARKIYVGNVPIDMPADRLLSLF
SQYGEIEEGPLGFDKQSGRSRGFALFIFKTVDATRRSLEEPTKIIDGHQLFCKLAVEGQK
QKPGGGNLGASAASDVSDISSLNHSQNQHQHQHQPQSHASGIQLGGYMNAGLGVSNPVGL
SGHHGLGASALSGLGTHANPGGIPGHSVHPSGLHGASNPVGSSLGMGVYGGLGPYGGGGG
YGGGSQGALGAGGGGGGGGYPSLFPSSAASQPGGFADGPGHYPLSAYQNQHQQSGASPAP
RLPGSGMYPGGQPFYPV
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggatgcgaagaagcgaaaagtggaagaaaacggtgggacgggggaagtggaagtagca
gttgcggctgaggatgttgggaaaatgatagagagcttcagccgcgagcagctggtggaa
attgtgcaggaggcgggggcgaagcacctggacgtcctggaggcgattcgaggcattgca
gacaaagatcctgcgctgcgcaagctcttcgtacgggggctcgggtgggatactaccact
gagtccctcaagtccctcttctcccacttcggcgagttggaggaaggtgtcgttataatg
gacaagaacactggcaagagcaagggttatggctttgtcactttcaagcacatggatggc
gctcttaatgccctaaaggagcccagcaaaaagattgatggccgcatgactgtaagccag
ttagcctccactggctcctcccagcagcacccccagccctctgctgacgtttcggctaga
aaaatctatgttggaaacgttcccattgacatgcctgcggatcgcctgctcagtttgttt
tctcagtacggtgaaatcgaagaagggcccctgggctttgataaacagtcgggccgctcc
aggggttttgctctttttatcttcaagacagtggatgccaccaggcggtctttagaggag
cccaccaagatcattgacggtcatcagttgttttgcaaactggctgtcgaaggccagaag
caaaagcccgggggtggtaatctcggtgcctcagcggcatctgatgtatctgatattagt
tctttgaatcacagccagaatcagcaccaacaccagcatcaaccccaatcccatgcctct
gggattcagttgggcggttatatgaacgctggactcggcgtttctaaccctgtgggttta
tctgggcatcacgggctgggtgcctcggctctgtccggccttggaacgcacgccaatcct
ggcggaattccgggtcactccgtacatccctcggggttgcatggagcgtcgaatcctgtg
ggatcctcattgggcatgggggtttatggggggctgggaccttatggaggtggaggtgga
tatggaggcggcagtcagggggcacttggggcaggaggaggaggaggaggaggtggctat
ccttctctcttcccctcttcggctgcttctcaacctggcggttttgcggatggaccgggt
cactatcccctttctgcctatcaaaatcaacaccaacaatcaggggcatctcctgcaccg
cggcttcctggtagtggaatgtatccaggagggcagcccttctatccagtttag

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