Cryptomeria japonica (Japanese cedar): 131064559
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Entry
131064559 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131064559 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131064559
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131064559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_19
Motif
Other DBs
NCBI-GeneID:
131064559
NCBI-ProteinID:
XP_057854709
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All DBs
Position
8:complement(37288837..37398185)
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AA seq
1160 aa
AA seq
DB search
MEESANQIPQSSLFPLQPNNTQQANDDKTINNSSSWLASASFNVSLLPSITSKTLDLDKN
SQFNIEDNNAQKVEENSAVHLEEDKLSYPILDSPGLEEDEIEDRETRRRRKRRKLDKKKD
KERSSKVKLWAGSEIKLAKDYYFDTKGDRDNLAFGSLYRVDIARYRLHHLIGESTFLDNG
SSYKSNQRITILNPEEDSLSLDDKSKVGRYWSAKSVSVEQRKDLKRLRVIPRRSPVFVHL
EDFISLQQETLPDQRNDLESAEVSESGEDWDEFVMHRTKEFNQMTRDKPHDENLWIAFAN
FQDEIASGQRKRSVQLQALEKKISILEKALELNPDSEELMLFFLETCRKRDNVSVLNQRW
EDALVKHSGSYKLWRGFLQFCKGEFSSFTVSKMRKMYGHALQALSAARNQLYRKVCESVK
SKLPCKELVESEQALVDIFVSLCKFEWQAGHQELAIGLFQAEIEYSLFPPLLQLTETNKQ
RLFEFFWNSEGAKLGEDGALGWAVWLEREEEKRQTEKLLNANLIDTEPGGWTGWSEPPSK
VSKEVTGEDHAFEEKPFTGDDNDDLDAEDSKKEDDMESLLEKLGLNLDPGKEVEVNDPLI
WKRWADEEAKRDREQWMPVHAKAGNTICHDGEENEDDEQLLRVVLFEDIRDYLFGLHCNE
VRFSLIVQLIDFCDGPISQWSCTNSSSWRGKIANLDSLSVPLFEEVQIVQHALAEKQITS
SNIDLQRIFGSVDSFFKAKDRAKFLHNVLLLASKAFPQNRHLKEALLISKGYVTSEVNSR
ISQVTGSRTLAKKLLKDNRQDLLLCGAYASIEAAAGNIDLARKIFDMALLALDDLPVDCR
SNAPILYLLYAEAELAHQYGVEVNGSNSSQQRAIHILSCLGTCGKYSTFSLAHHVSSTQL
LKARRGFGEQLWHLRSMWAHGEITEQCTALVVSAALLEELTIGWEAAARVYKDAFSMALP
ERRQQSLELELLYVRYIQMLEKNKVLVRPSQSWDLILQGLSQYPWNSRIYVSLIEISTNS
AFTCKLRRLFDEYCQSNPSTVLWIFALTFELGRQSSGPRIHRLFERALADSDTQQSVILW
RCYLAYELHIACNGDAARRIFFRAIHACPWSKLLWLDGFKKLSNILTAKELSDLQEVMHD
KELRLRTDIYEILLEEETKL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcagcaaaccaaattcctcaatcttcattatttcctctccagcccaacaat
acccaacaggcaaatgatgataaaaccatcaataattcttcctcatggctagctagcgcc
agtttcaatgtaagtctgcttccctcgataacgtctaaaaccctagacttagacaaaaac
agtcaattcaatatagaggataataatgcccaaaaagtagaggagaatagtgcagtgcat
ttagaggaggataagcttagctatccaattttggattcacctggtttggaggaggatgaa
attgaggacagggaaaccagaaggagaagaaaaaggagaaaattagataagaaaaaggat
aaagagaggagctcaaaggttaagttgtgggcaggttcagagatcaaattggcgaaggat
tattactttgataccaaaggagatcgtgataatttggcattcggttctctttacagagta
gatattgctcgctacaggcttcaccatttaattggggagtcaacttttcttgacaatggt
tcctcatacaagagcaaccaaaggataacaatattgaatccagaagaggacagcctttct
ttagatgacaaatcaaaagtaggacgctattggtctgcaaagtctgtatctgttgaacag
cgcaaggacctaaaacgtctacgtgttattcctagacgaagtcctgtttttgttcatttg
gaagattttatttctttgcagcaggaaaccctaccagatcagaggaatgacctagagtct
gcagaagtcagtgaaagtggagaagattgggatgaatttgtcatgcacagaaccaaggag
ttcaatcaaatgacaagggacaaaccacatgacgaaaatttgtggatagcttttgctaat
tttcaggatgaaattgcatctgggcaacgcaagagatcagttcagctacaagctctggag
aaaaaaatctctatactagaaaaagcacttgaacttaatccagacagtgaagagctgatg
ctttttttcttggagacttgtagaaaacgtgataatgtttctgttttgaaccaaagatgg
gaagatgcgttagtaaagcattcagggagctataaattatggagagggtttctgcaattc
tgcaaaggagaattttcctcatttacagtctcaaagatgagaaagatgtatggccatgct
ctccaagctttatctgctgcacgtaatcagctctataggaaggtttgtgaaagtgtcaag
tcaaaattgccttgtaaagaacttgtagaatctgaacaagcacttgtggatatttttgtt
agcttgtgcaagtttgaatggcaggcaggtcaccaagaactagctattgggttgtttcag
gcagagattgagtacagtttatttcctccattgcttcagctgactgagacaaataaacaa
agattatttgaattcttttggaatagtgaaggtgcaaaattaggggaagatggtgccttg
ggatgggctgtatggctagagagagaggaggagaaaaggcagacagaaaagctactcaat
gctaatctgatagacacagaaccaggaggttggacgggttggtctgagcctccgtccaaa
gttagcaaagaggtgactggtgaagaccatgcatttgaagagaagccatttacaggagat
gacaatgacgatttagatgctgaagactcaaagaaggaagatgatatggagtctttactt
gaaaaactaggattgaatcttgatcctggcaaagaagttgaggttaatgatccacttatt
tggaaaagatgggcagacgaagaggctaaacgagatagggagcagtggatgccagtccat
gcaaaagcagggaatactatatgtcatgatggagaagaaaacgaagatgatgaacagctt
ttgagggttgtcttatttgaagatattagagattatctttttggtttgcactgtaatgaa
gttcgtttctccttgattgtccagttgattgatttctgtgatggaccaatcagtcagtgg
agctgtactaatagttcaagttggagggggaaaattgctaatctggactccttatctgtt
cctctttttgaagaagtacaaattgtgcaacatgctttagctgagaagcaaataacttca
agtaatattgacttgcaaaggatttttgggagtgttgattcttttttcaaggcaaaagat
cgtgcaaaatttcttcataatgtgttactacttgctagtaaagcattccctcagaatcgt
cacttgaaagaagcactgctgatttctaaaggatatgtaacatctgaagtgaattctagg
attagtcaagtcactggatcacggactcttgcgaaaaaactactaaaagataatcgtcag
gacttactactttgtggagcgtatgcatcaatagaggcagcagctggtaacattgatttg
gcacgtaaaatttttgacatggctctcttggctcttgatgatctaccagtggattgtcgg
tcaaatgcacccattttgtatctcttatacgcagaagcagaacttgcacatcaatacggt
gttgaggtgaatggtagtaactcttctcaacaaagagcaattcacatactttcttgtttg
gggacttgtgggaagtactctacgttttcattggcacatcatgtttcaagtacccagtta
ttgaaagcacggcgagggtttggagagcagttatggcacctgcgctcaatgtgggcacat
ggggaaataacagagcagtgcacagctttggtagtttcagcagccttattggaagaatta
acaattggatgggaagctgcagctagagtttataaagatgctttttcaatggcacttcca
gaaagacgacaacagagtcttgagcttgaacttttgtacgtacgttacattcaaatgctt
gagaagaataaagttttagtgagaccatctcaatcatgggacctaattttacagggtcta
agccaatatccttggaattcaagaatttatgtttcattgatagagatcagcaccaattct
gccttcacctgcaagctgcgtcggctatttgatgagtactgtcaaagcaatccatctact
gttctctggatatttgctttgacattcgaacttggaagacaaagctcaggaccacgcatt
catagactatttgagcgggcattggctgactcagatacccaacagtcagtaatattgtgg
cggtgctaccttgcttatgaactccatattgcatgcaatggtgatgctgccaggcgcatt
tttttcagagctattcatgcttgtccatggtcaaagctgttgtggcttgatggctttaaa
aaactgagcaatattttgacagcaaaggagctgtctgatctccaagaggtaatgcatgac
aaagaactacgactgaggacagatatttatgaaatccttttggaagaggagaccaaactt
taa
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