Cryptomeria japonica (Japanese cedar): 131064780
Help
Entry
131064780 CDS
T10556
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131064780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131064780
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131064780
mRNA degradation factors
5'-3' decay
Decapping complex
131064780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
DUF5587
Motif
Other DBs
NCBI-GeneID:
131064780
NCBI-ProteinID:
XP_057855030
LinkDB
All DBs
Position
11:570660959..570683446
Genome browser
AA seq
360 aa
AA seq
DB search
MSQNGKLTPQLDKEATNMLNLTVLQRIDPYVEQILTTAAHVTFYKMDVETTTWSRKDVEG
SLFVVKRKTQPRFQFIVMNRRNTVSDFVLQTENLVQDLLGGFQFEVQVPYLLYQSSAKEV
TGIWFYNHHECEEIANLFNRILSAFSKVSPKPKSFTPNSSEFQELEGVPTLAIMEGPLES
TESTPVTDAEVSEEPLEHFFVESASLMPSAATHSLPSWSLRSSSPMPTLMPLPSPPLAAP
SVPMGYMGRVDVGTSHLTTPMKPSFFVPPHSSSTLMPPLIYSAPTAPPLQPPSYLQPSHG
EPLLQPFPPPAPSPSLTPASSMSHGPIMTRDGISNALLRLLKNEHFIDMVYREMMNAHLS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaatgggaaattgacgcctcagttggataaggaagccaccaatatgcttaat
ctcaccgttcttcagcggattgatccctatgtcgaacagatcctcaccaccgctgcgcac
gtcacattctacaagatggacgtcgaaaccacaacatggagccgcaaagatgtcgaaggt
tcgctcttcgttgtgaaaaggaagacgcaaccgaggtttcagttcattgtgatgaatagg
cgtaatactgtttctgattttgtattacaaacagagaacttggtacaggatctacttggc
ggttttcaatttgaggttcaagttccatatttgctttaccagagttcagccaaagaggtg
actgggatctggttttataaccaccatgaatgtgaagagattgcaaatctttttaacagg
atactgagtgccttctccaaagtttctccaaaaccaaaatcatttacacctaacagctct
gagtttcaagagctggaaggagttccaactttggcaatcatggagggtcctctagagtct
actgaatcaactccagtcaccgatgcagaggtttctgaagagccccttgaacattttttt
gtggaatcagcttccttgatgccatcagcagctacacacagtttaccaagttggtcactg
agaagttcttcaccaatgcctacactaatgcctcttccatcccctcctttagcagctcca
tctgtgccaatgggttacatgggtcgagtggatgttggcacaagccacctcacaactccc
atgaaaccttctttctttgtaccaccacattcctcttcaacactgatgcctccactgatt
tattcagcaccaacagctccaccacttcagcccccttcatatctgcagccttcacatggg
gaaccacttcttcaacctttccctcctcctgctccatcaccatctcttactccagcttca
agcatgagtcatgggccaattatgacaagggatggaatcagtaatgcactacttagatta
ctaaagaatgagcatttcattgacatggtgtatcgggagatgatgaatgcacacctttca
tga
DBGET
integrated database retrieval system
