Cryptomeria japonica (Japanese cedar): 131064911
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Entry
131064911 CDS
T10556
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
131064911
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131064911
Multi subunit type E3
ERAD complex
131064911
LMBR1L-GP78-UBAC2 complex
131064911
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131064911
NCBI-ProteinID:
XP_057855223
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Position
3:complement(110415320..110484361)
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AA seq
596 aa
AA seq
DB search
MGRSYGLIIASYTAVSLCGVAWRINLALNKVLLDGRTLEEGIESVQAGYILQLLLESPLT
VALLVNLAINIFILVSLSIKAVFFGQLSSTETRKVIERIINYILYKGIFLIWIVQPDIVQ
ITLWLTWFSVLGSLKMFQGLAKDRLERLNASPSATPWAHLRVFSVLVLVLFSDLFWIRLC
TVVSKGAGTSTFWLLIFEPLSIAFETLQAVMVHGLQLIETWHRHHADDIVHCQGLEPSDR
SAAGASWEWKGTFVRNCGFFMEIVTLLMALGHCLHIWWIRGLAFQLVDAVLFLNLRALLS
SILRRIKGFMRLRTAMNTLQGALPDATQDELHAYDDECAICKEPMARAKRLPCSHLFHLQ
CLRSWLDQGIGETYSCPTCRRPLFMGGSRTSPNANVGQQLVEGEQLVRPVNTGPDALSQT
LSENTLPTSPFSTERWNSTGIGMFRGVGLDPGWGNPWPNAGLDGAGPSTGMRSVGFGRVQ
MMMRQLAGVSGTYAHATSSDDNAWRLWSMSPHDGGSVQTTFSGRPRTAVGGVRIRNAMPG
QTADNNGMPNTAGMINPRITAMTNMVREVLPHIPDDIIIQDLRRTNSVTATVNNLL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaagttatggcctcattattgcttcatatacggcagtcagcctttgtggagtt
gcatggagaattaatttggcactgaataaggtccttttagatgggagaacgttggaggaa
ggcattgagtctgtacaagctggatatattttacagttgcttcttgaatcccctctcaca
gtagcattgcttgtcaaccttgcaatcaatattttcattttggtttctctttctataaag
gctgttttctttgggcaactctcctcaacagaaacacgaaaggtcatcgaacgcattata
aactatatactttataaggggatttttcttatatggatagtacagccagatattgtgcaa
atcaccttatggttgacttggttctcagttctcggatccctgaagatgttccaaggactg
gcaaaagatcgcctagagcgactgaatgcatctccttctgcaacaccatgggctcattta
agagtgttttctgtactagtcttggttcttttctccgatttgttctggattcggctatgt
acagttgtttccaagggtgcaggaacaagcacattttggctcttgattttcgagcctctc
agtattgcatttgaaacactgcaggcagttatggtgcatggattacagttgattgaaact
tggcatcgccatcatgcagatgacatagttcattgtcaaggattagaaccatcggataga
tctgcagcaggtgcttcttgggaatggaagggaacttttgtcaggaattgtggttttttt
atggaaattgtaactttgttgatggctcttggacactgtttgcacatttggtggattcgt
ggtcttgcctttcaacttgtagatgctgtgcttttcctgaatctacgtgcacttctaagt
tcaattttgcggcgtatcaagggatttatgaggttgaggacagcaatgaatactcttcaa
ggagcattacctgatgcaactcaagatgagttgcatgcatatgatgacgaatgtgcaatt
tgcaaggaaccaatggccagggctaagaggctgccttgttcacaccttttccatcttcaa
tgtctgagatcctggttggaccaaggcattggagaaacatattcttgtccaacctgtaga
aggccattgtttatgggtggctcaaggacgtctccaaatgctaatgttggccagcaatta
gtagaaggtgagcaactagtcaggcctgtaaacacagggccggatgcattatctcaaact
ctgtctgaaaataccttaccgacaagcccattttcaactgaacggtggaattctactggc
attggcatgttcaggggtgtgggacttgatcctggttgggggaatccttggccaaatgca
gggttggatggtgctggtccctcaacaggaatgagatctgtgggatttggtagggttcaa
atgatgatgaggcaacttgctggtgtcagtggaacctatgcacatgccacatcatctgat
gacaatgcatggagactgtggtcaatgtccccacatgacggtggttcggtgcagacaaca
ttctctggcaggccaagaacagctgtagggggtgtacgcattagaaatgctatgccagga
caaactgcagacaacaatggtatgccaaatactgccggcatgataaatccccgcataact
gcaatgaccaacatggtaagggaagtactgccacacattcctgatgacatcatcattcag
gacttgcggcggactaattctgttactgcaactgttaataatctgctctaa
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