Cryptomeria japonica (Japanese cedar): 131065022
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Entry
131065022 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131065022
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
HECT type E3
131065022
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131065022
NCBI-ProteinID:
XP_057855371
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Position
1:430007435..430208601
Genome browser
AA seq
1037 aa
AA seq
DB search
MFFSGDSSRQKKVDLGGRSSRERDRQKYLDETRIAREQRQRFRHHTLTAIKIQKCFRGRR
AVAVARSEIRQQFCTQFGENGERADRNAFKPSSKYLCQLLFFFRANDSEDIIRLVEACRL
LCQSVQASGNILDILVDGNPSTDQHIVTYRVKRFVLCCLQALHQNREQFKFQLLSTSGSA
DLPALLLLEIVVILTDSSFPLAGNTLDYVLEKYTFGHFRELILTVSEQGGQTSVSGAGVS
HLECVLTRLAFQSTKMHYTGHEFPLKLSFPAQIMSIPFLWKQFPNLKQVVVSQALWSCYI
QQIASALPGHLNLLPPDISPTLPGPACLLGNILEVARFVLSQPNCTLKMQALEFATVLNF
LMEELPHNFKSSTTEKSNNDEDSDMDENAGLITLSEDLEKQILNAVDTDFLKELVRILCI
EVSPPGGTNSNEGPSDEEAAAVTAVCAFLHVTFMVLPLERFMTGLAYTTELVPMLWCYMK
RCHLSHRWPSAEALTALCPGDAPGWMLPLSVFCPVYRHMLMIIDNEEFYEQQKPLSLRDI
KDLVIILKEALWQLLWVIPSKATAVQKPIQSESSQKRFSLQSIQDKVSTVAAELLAQLQD
WNSRRQFTSPYDFHAREAVDEIFFTQAASENTRAHELLKRAPFLVPFTNRVRIYTSQLAA
ARQQNSVHTPFARHRIRIRRDRAVEDAFNQLNGLTEVELRGMVRVTFVNEFGVEEPGVDG
GGIFKDFMENITKTAFDIQYGLFKETSDHLLYPNPASGTIHAEHLQYFEFLGKILGKAMF
EGILVDIPFATFFLSKLKEKHNYLHDLPSLDPELYRNLLSLKHYEGDVSQLGLYFVSEDN
EFGEQKEEELLPGGKDIQVTNGNLIMFIHLVANHRLNNQIRNQSSSFLRGFKQLIQSDWI
SMFNEHELQLLISGSMDNMDVDDLHSNVHYAGGYSEDHPVIQLFWEVIKKFNLQQQKRFL
KFVTGCSRGPLLGFKYLEPPFCIQRAAPEDAPDELLDRLPTSATCVNLLKLPPYKSKEVL
ENKLLYAISAEAGFDLS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctcgggggactcgtcgaggcagaagaaggtggacttgggagggcggagtagc
agggagcgcgataggcagaagtatttggacgagactaggattgctcgcgagcagcgccaa
agattccgccatcacacgcttactgccatcaaaattcagaaatgctttagaggtagaagg
gcagtggcagttgcaaggtctgaaatacgacagcagttctgcacgcaatttggagagaat
ggtgaacgggctgacaggaatgctttcaagccaagttccaaatatctctgccagttgttg
ttcttctttcgagcaaatgacagtgaggacattattcgccttgtggaagcttgtcggtta
ctttgtcagtctgtgcaagcatctggtaatatattagacatactagtagatgggaatcct
tctactgatcaacacattgtaacatacagagtaaaacgctttgtcctttgttgtctgcaa
gcattgcaccaaaaccgtgaacaattcaagtttcaactattaagtacttcaggatcagct
gatttaccagcattgttactgttggagatagttgtaattttgacggattcttcctttcct
ttggctggaaacactttggactatgttctggaaaagtatacatttggacatttccgtgag
cttattctcactgtgtcagagcaaggaggacaaactagcgtttctggagctggggtatct
catctagaatgtgtgcttacaagacttgctttccagtccactaagatgcattacactggc
catgaatttcccctgaaattgagttttccagctcaaattatgtctattccttttctatgg
aagcagtttccaaatctgaagcaggtggttgtgagtcaagctctctggtcatgctatatt
caacagatagcgtctgctttgcctggtcatctgaatcttcttcctcctgatatatctcca
acacttcctggtcctgcttgccttcttggcaatattctagaagttgctcgatttgtatta
tctcagccaaattgtacactgaagatgcaggccttggaatttgcaaccgtcttaaatttt
cttatggaggagctaccgcataatttcaagtcttcaaccacggaaaaatctaataatgat
gaagatagcgatatggatgagaatgctgggttgataacactgagtgaggatttagagaag
caaatccttaatgctgtagatacggattttcttaaagaattggtgaggatattatgcata
gaggtttctccacctggtggcactaattcaaatgaagggccctctgatgaagaagctgca
gctgttactgcagtttgtgcatttttgcatgttacttttatggtgctaccccttgaacgt
tttatgactggtctagcatatacaacagaacttgtcccgatgctttggtgctacatgaaa
cggtgccacctgagccatagatggccatctgcagaagctttaacagcactttgtcctggt
gatgctcctggctggatgctacccctttctgttttctgtccagtttataggcacatgctg
atgataattgataatgaggagttctacgagcaacaaaagccactttctctacgtgatatt
aaggatttggttatcattttaaaggaggcattgtggcagctgctatgggtgataccctca
aaggctactgcagttcaaaagcccattcagtctgaatcaagtcaaaaaagattttcatta
caatctattcaggacaaagtcagcacagtagcagctgaactcttggcacagttgcaggat
tggaatagcaggcgccagtttacatctccatatgattttcatgcccgtgaagctgttgat
gagattttctttacgcaggcggcaagtgaaaacacaagagcccatgaattgctgaaacgg
gctccattcttagtcccattcacaaatcgggttcgaatttatacttcacaattagctgca
gccagacagcaaaacagtgttcacacaccctttgcacggcatcgaataaggatacggcga
gatcgtgctgtagaagatgcattcaatcaattgaatggattgacagaagtggaactgagg
ggaatggttcgtgtgacatttgtgaatgaatttggagtcgaggagcctggtgttgatgga
ggtggtattttcaaagatttcatggagaatataactaaaacagcctttgacatacaatat
ggacttttcaaggaaacatctgatcatcttctctatccaaatcctgcatccggcacaata
catgctgaacatcttcaatattttgagttccttggaaaaatccttggaaaggccatgttt
gaggggattctagtggacattccatttgctacattctttttaagcaagctcaaggaaaag
cacaactatttgcatgatcttccttctttggatcctgagctttatcggaaccttctctca
ttaaagcattatgaaggtgatgtttcacaactggggctctattttgtaagcgaagataat
gagtttggtgagcagaaggaggaggagctcttaccgggtggaaaggatattcaagtgacc
aatgggaacctgataatgtttattcatcttgttgcaaaccatcgtctgaataatcaaatc
cgcaatcaaagttcttcttttctgcgaggattcaaacagcttatacaatctgattggata
agcatgtttaatgagcatgaacttcagcttcttatatcaggttcaatggataacatggat
gttgatgacttgcactccaatgttcattatgctggaggttatagcgaggaccatcctgtc
atacaattgttctgggaagttatcaagaagttcaatttacagcagcaaaaaaggtttttg
aaatttgtaactggatgctcaagaggaccactacttggtttcaaatacttggaacctcca
ttctgtatccaaagagctgctcctgaagatgctcctgatgaacttcttgatcgcttgcca
acttcagcaacatgtgtgaatcttctgaagctccctccgtacaaaagtaaagaagttctg
gagaataaattgctctatgcaataagtgctgaagcgggatttgatctaagctaa
DBGET
integrated database retrieval system
