Cryptomeria japonica (Japanese cedar): 131065044
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Entry
131065044 CDS
T10556
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131065044
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131065044
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Chromo_2
Motif
Other DBs
NCBI-GeneID:
131065044
NCBI-ProteinID:
XP_057855397
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All DBs
Position
11:315672512..315836581
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AA seq
636 aa
AA seq
DB search
MGVAGGFWDLVKPVARYEDVEYLRGKKMSVDLSYWIVQQETALKGNARKPHLRLTFFRTV
NLFAKLGVFPLFVVDGDAPTLKSPTRLDRFCKMTGIDYSSHKNVESTIIARNPVFNQYIE
ECVELLDLMGMPVLRAKGEAEALCAQLDREGRVDACLTADSDAFLHGAKCVIKCLRVDCK
EPIIECYRASDIDTCLRLKRKHLIALALLVGCDYNSHGVPGIGLNTAVRITHLFQEEEIL
DKLCEIGKGNTLLCSEMDNSKTENFESEHTAGMPVKKRPHCSQCGHPGNKVSHLKLGCDG
CKGLYSDAKCVEKYPGWKCACAGCMQEQKKKEHNKWLHWQTKTFSKICATDGFPNNEIVN
MYLGNETSALGDLQMNAESLSWQAPKMEFLEDFLGHHLFWDRSYTRQKILPLCSVMLLRK
MAANKEGVSASEESQLLYNRYVPHSVERIKVRYSQSFYVLKWKHVNSECNNDDWLGLKSK
DLQLQKRKASVVCNFQNGCDEEFQAVEVHTTKGNLFITTDEDVELVRAACPKLVEIFEYE
KAAKKRRAAVSKCSKGKETSTVKQLTITSYFKATKGLVRSKPRKTSSTVGDSKDRNTRAN
LTLPVPLEKTVESIKTMVPVINDPVSQVELSTHDLV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggcagggggattttgggatttggtgaaacctgttgcacgctacgaagatgtg
gaatatttgagagggaagaaaatgagtgtagatctctcatattggattgttcaacaagag
actgctcttaaaggaaatgccaggaaaccccacctgcgcctcaccttctttcgaactgtc
aacttatttgcaaagcttggtgtatttccactgtttgttgtggatggggatgctccaact
ttgaagtctccaacacggttggatcgtttttgtaaaatgacagggatcgattactcttcc
cataaaaatgttgaaagcaccatcattgcacgtaatcctgtctttaatcaatatattgaa
gaatgtgtggagctgttagatcttatgggcatgccggttttaagagcaaagggtgaagct
gaagcactttgtgcacaacttgatagagaaggaagggtggatgcttgtcttacagctgat
agtgatgcatttcttcatggggctaaatgtgtaattaagtgccttcgagtagattgtaag
gaacccattattgaatgctatagggcatcagatattgatacatgcctcaggttgaagagg
aagcatctaatagcattagcattgttggtgggttgtgactataactcacatggagtaccg
ggcattgggcttaacactgcagtgcgcattacccacttattccaggaagaggagattctt
gacaagctttgtgaaataggtaagggaaacacattgttatgttcagagatggacaattct
aaaacagaaaattttgaatcagaacacacagctggcatgcctgtgaaaaaaagacctcac
tgttctcagtgtgggcacccagggaacaaagtgagtcatcttaagcttgggtgtgatggt
tgcaagggcctttacagtgatgcaaagtgtgtagaaaaatatcccggttggaaatgtgca
tgtgcaggctgcatgcaggagcagaaaaagaaggaacacaataaatggctgcactggcaa
acaaaaactttttctaaaatttgtgcaactgatggatttccaaataacgaaattgtcaat
atgtatcttggcaatgaaaccagtgctcttggtgatttacagatgaatgcagaatctctt
tcatggcaggcccctaaaatggagttccttgaagacttcctgggccatcatttattttgg
gatcgatcatacacacgtcagaaaatccttcctctctgttctgtgatgttattgaggaaa
atggcagcaaataaggaaggagtaagtgcatcagaggaaagccagcttctgtacaataga
tatgtgccacattcagttgagcgtattaaagtccgttactcccaatccttctatgtactt
aaatggaaacatgtcaattctgagtgcaataatgatgattggttgggcttaaaatctaaa
gacttacagctgcagaagagaaaagcctcagtggtatgcaattttcagaatggatgtgat
gaagaatttcaagcagttgaagttcataccacaaaaggaaatttatttataacgacagat
gaagacgtggagcttgttagggctgcatgtcccaagctggtggaaattttcgaatatgaa
aaggctgctaagaaaaggagggctgctgtatcaaaatgtagtaaaggaaaagaaacctct
actgtaaagcaactcaccataacatcatattttaaggctacaaaaggactagttagatca
aagcctaggaaaacatcatctacagttggagatagcaaggacagaaatactcgtgcaaat
cttaccttacctgttccacttgaaaaaacagtagaaagcataaaaaccatggttcctgta
attaatgatccagtttcacaagttgaattaagcactcatgacctagtttaa
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