Cryptomeria japonica (Japanese cedar): 131065242
Help
Entry
131065242 CDS
T10556
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
131065242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cjf03011
]
131065242
Ribosome [BR:
cjf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
131065242
Bacteria
131065242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
RRP4_S1
OB_RRP5_4th
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
131065242
NCBI-ProteinID:
XP_057855687
LinkDB
All DBs
Position
2:348356536..348510044
Genome browser
AA seq
476 aa
AA seq
DB search
MLWQPPLTLKGKLAILHFPLNPRTRSPSSFFTRHKSITISHKLRSHSSSNDLIIANDNSA
ELELLEKPTAAVAKEQQEVAVEESSDDEENESMTSFMSVFSADPYLEEETMDEWVPSTEE
DVEFYDPKVGDLVLGVVVSGNAHRIDVNIGADALATMLEKEVLPLHDQEMERVLCEVAQK
DSVDAGDFFSPGKVGVVKNEEALSPGPAPGRPVVDFGTVLCAEVLGRTLGGKPLLSSRRV
TRRIAWQRVRQIKKLNEPIDVCISEWNTGGLVTRIEGLRAFLPKIELVNKPYENFTTLRS
NVGRQITVLITRVDEENGDLIISEREAWVMKHLCEGTLLEGSITKIFSYGAQVRVDGTSL
SGLLHITNISRARVQSVKKLFSEGEKVKVMVTHSVSPNKISFSTADLESEKGLMLSDKQK
VFDEAEKMATAYRQKLSSVLGFRRSKLPPEDVDQHDNGAEFYANWSWVEFEAEIPQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcagcctccattgaccctgaagggcaagcttgctatcctccactttcccctt
aatccaagaaccagaagcccctcatcctttttcactcggcataaatctatcaccatttct
cataaacttcgttcccactcctcttcaaatgacttaataattgccaacgataacagtgca
gaattggagttgcttgaaaaaccaacagctgcggtggccaaggagcaacaggaagttgca
gtggaagaaagctcagatgatgaagagaatgaaagcatgacgtccttcatgagcgtattt
tctgcagacccatatttggaggaggagacgatggatgaatgggtaccaagtacagaagaa
gacgtggaattttatgatcccaaagtgggagatttggtgttaggtgttgtggtgtcgggc
aatgcacatagaattgatgttaatattggcgctgatgctctcgctacaatgcttgaaaaa
gaagttctccctcttcatgatcaggagatggaacgagtcctttgtgaagtggctcagaaa
gatagtgtagatgcaggggattttttttctcctggtaaagtgggcgttgtgaaaaatgag
gaggcgttgagcccgggcccagcacctggccgtccagttgttgattttggaacggtactt
tgtgctgaggttttgggaaggacattgggtggcaaacccctgctttcttcaagacgagtt
acaaggcgcattgcttggcaacgagtgaggcagattaagaagctgaatgagcccatagac
gtttgtatttcagaatggaacactggagggcttgttacaaggattgagggcttaagagca
ttccttcccaaaatagagttggtgaacaaaccttatgagaattttacaaccttgagatct
aatgtggggaggcagataactgtattgatcactagagtggatgaagaaaatggtgattta
ataatcagtgaaagggaagcttgggttatgaaacatctttgtgaaggaacattacttgaa
gggtctataacaaaaatattttcatatggagcacaagtgagggttgatggaacaagccta
agtggattgcttcatataacaaatatttctcgagctcgagttcaatctgttaagaagttg
ttttcagagggtgaaaaggtcaaagtcatggtgacacattctgtgtctcctaataaaatt
tccttcagcacggcagatcttgagagtgaaaagggattgatgctttcagataaacagaaa
gtttttgatgaagcagaaaagatggcaacagcgtacaggcagaaacttagttcagtacta
ggttttcggagaagcaaattgcctccagaagatgtggatcaacatgacaatggagcggaa
ttctatgcaaattggagctgggttgagtttgaggccgaaataccacagtga
DBGET
integrated database retrieval system
