Cryptomeria japonica (Japanese cedar): 131065314
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Entry
131065314 CDS
T10556
Name
(RefSeq) U-box domain-containing protein 8
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131065314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131065314
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131065314
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
U-box type E3
131065314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
Arm
ARM_ARMC5
zf-Nse
zf-RING_UBOX
ARM_LIN_C
BAF250_C
HEAT_2
ELMO_ARM
TOR1L1_N
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
131065314
NCBI-ProteinID:
XP_057855763
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All DBs
Position
4:12738804..12741768
Genome browser
AA seq
397 aa
AA seq
DB search
MDCRPPDDFRCPISLELMSDPVILCTGQTYDRTSIQRWLESGKRTCPNTTMPLHDTKLIP
NYALRSLISQWAQTHGVDLKRPAISDGAQRHPSSAPHETKKSLEILVKTLANNTSNNNVL
VQSRRDAIRQIRTLAKQSRETRLQIVEAGAVARIIPLLSCRDSQTEEHAMVALFYLSLED
DNKVGLVAEGAVDLIVNALKHGSMDTRATAAVTLTSLAIVDVNKATIGSHSDAIGALVNL
LVEGDARARKEATTALYSLCFYNDNKRRAVMAGAVSLLLEAVVNCVGVLNESVERPLGLL
NMLATVSEGRAALVLQKGIMGSMVKVLREGTFRSREHAVAILSSLCCNSKQRAIEARQAG
VMEHCSQFLEDGTPRTKRKALVLMKALEDTVNHGLGS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaggccgccagatgatttcaggtgccctataagcttggaactgatgagcgac
ccagtcatcctgtgcacaggccagacatatgacagaacgtccatacaaaggtggcttgaa
tccggtaagcgcacatgccctaataccacaatgcctcttcatgatactaaattgatacca
aattatgctcttcgtagcctcatatcacagtgggcacaaacccatggtgtggacttgaag
cgtccagccatttcagatggtgcacagaggcacccgtcctcagctccccatgaaactaaa
aaaagcctagaaatccttgtaaaaaccctagccaataacaccagtaacaataatgttcta
gttcaatccaggagggacgctataagacagattcgaacccttgccaagcagagccgtgag
actcggctccaaattgtggaagctggggctgtggctagaattatacctcttctttcgtgt
agggattcacagactgaagaacatgctatggtggcattgttttacttgagcttggaggat
gataacaaagttggtctggttgctgagggtgctgtagatttgattgttaatgcactaaag
catggttctatggatactagggctactgctgctgtgaccctaacaagcttggctatagtg
gatgtgaacaaggcaacaattggaagccactccgatgctatcggtgcccttgtaaatctc
cttgtagagggggatgctcgtgcccgaaaggaggcaactactgcactgtatagtctttgt
ttctataatgataacaagagaagagctgtcatggcaggggcagtgagcctgctattggag
gctgttgtcaactgtgtgggtgtgttgaatgaatcggttgagaggcctcttggtctcctt
aacatgttggctactgtatcagaggggcgggctgcacttgttctccagaaggggatcatg
gggagcatggtcaaggtgctcagggaaggcactttcaggagcagagagcatgctgttgca
attttatcatccctttgttgcaatagcaagcagagagctatcgaggctcggcaggctggt
gtgatggagcattgtagccagtttcttgaggatgggacaccacggacaaagcgtaaggca
ttggttttgatgaaggctctggaggacactgtcaatcatggtttggggagttga
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