Cryptomeria japonica (Japanese cedar): 131065628
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Entry
131065628 CDS
T10556
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131065628
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131065628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Motif
Other DBs
NCBI-GeneID:
131065628
NCBI-ProteinID:
XP_057856172
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Position
3:5807055..5808386
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AA seq
443 aa
AA seq
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MVSKAVERELVELFEIAMEAADRVAHSKGPPKGEEQRCLDALKALRSVPVNTSILLSTGI
GKKLRIITRHPIEDIRTQATELFEVWKKIVSSEINDTNENQTSKSQAKKPIKKPSNSEYK
ISSQDESSSRETKPKYEKTERIESSNARVERKKNLEKDTATKPERGEASKSSVDKKFKGG
EDKTKATVEKRKYQEEENEIPRWEKERIGINGKPEEDRMPNFDKKRKLKENRIPICDGPE
LIEARVDKNLKIEEDRIPNDPPQRPINFPKCNDPPRDKYRELVANALNRVYSEADGDDLE
RANKCDPGNVADKVETALFKKLGNKDGPQKMKYRSIFFNMNDQRNPDFRRRVLLGEVEPE
RLYNISADEMASDELRLKRQRIKDKALFDCERGISQSATTDQFKCGKCGQRKTSYYQMQT
RSADEPMTTFVTCVNCNNHWKFC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaaagcagttgaaagggagttagttgaactgtttgagatagcaatggaggct
gcagatagagtagcccacagtaagggacctcccaaaggagaagagcaaagatgtcttgat
gccctaaaagcccttcgttctgttcctgtaaataccagtattctcttgtctacagggatt
gggaagaaactcagaattattacaaggcaccccatagaggatattagaactcaagccacg
gaattatttgaagtatggaagaaaattgtttcctcagaaattaatgatactaatgaaaac
caaacttctaagtctcaagccaagaaacccattaagaaaccttcaaattctgaatataaa
atttcttcccaggatgaaagctcttccagggaaacaaaacccaagtatgagaagactgaa
aggatagagtcttcaaatgccagagttgagaggaagaaaaacttggaaaaagatacagca
actaaacctgaaagaggagaggcttcaaagtcaagtgttgataagaaatttaagggagga
gaagataaaacaaaggctacagtggagaagagaaaatatcaggaagaagaaaatgaaata
cccagatgggaaaaggaaaggattggtatcaatggtaagccagaagaagatagaatgccg
aattttgataagaaacgcaagctaaaagaaaatagaatacccatttgtgatggtccagag
ttgatagaggctagggttgataagaatcttaagatagaagaagatagaattccaaatgac
ccccctcaaaggcctataaattttcccaagtgcaatgatccacctagagataaatacagg
gagcttgtagcaaatgctttaaatagagtttatagtgaagctgatggggacgacttggaa
agggcaaataaatgtgaccctggtaatgttgcagataaagttgaaacagcattatttaag
aagctgggcaataaagatgggcctcaaaagatgaagtataggtcaatatttttcaacatg
aatgaccaaaggaaccctgactttagaaggagggttctcttaggggaagtggagcctgag
agactctataacatatcagcagatgaaatggccagtgatgaactgagattgaagaggcaa
aggattaaagataaagctctttttgattgtgaaagaggaatcagtcaaagtgctacaaca
gatcagtttaagtgtggtaaatgtgggcaaaggaagactagttattatcagatgcaaaca
agaagtgcagatgaacctatgactacttttgtcacttgtgtaaactgtaataaccattgg
aaattctgctga
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