Cryptomeria japonica (Japanese cedar): 131066381
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Entry
131066381 CDS
T10556
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131066381
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjf00535
]
131066381
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131066381
Meiosis-specific proteins
Cohesin complex and associated proteins
131066381
Proteoglycans [BR:
cjf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
131066381
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
LEKR1
ATG14
CCDC39
DUF7491
APG6_N
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
131066381
NCBI-ProteinID:
XP_057857117
LinkDB
All DBs
Position
3:899700573..899852586
Genome browser
AA seq
1204 aa
AA seq
DB search
MFIKQVIIEGFKSYKEQVATEPFSPKHNCVVGANGSGKTNFFHAIRFVLSDLFHNLRAED
RQALLHEGAGHQVLAAFVEIVFDNSDNRIPVDREEVRLRRTIGLKKDEYFLDKKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRKESLKIMQ
ETENKRKQIIEVVQYIEERLKELDEEKEELKKYQQLDKQRRSLEYTIFEKELQDAKQKLE
EIEEARAKVSEKSTSMYNSVLEAHERFKTLEKDLKNLSKESQAMTKEKDAAEKRKTETMK
RHAKVELDVRDLEERISGEGRMKEDVAKELKSLEKEIQKSRKELEKVRPLHDQQLLEEEE
ITRGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLQRVLSSTMAQEQKLREEI
EQLNQEFEEQEKSIEARSVELKEQESDISKCQGEFASLKIERDGLQETRKKLWKQENELA
SEIDKLKSEIAKAEKSLDHAAPGDIRRGLNSIRRICRDHSIPGVFGPICELLDCDEKFFT
AVEVTAGNSLFHVVVESDEISTRIIRYLTAEKGGRVTFMPLNRVRAPQVAYPHNPDIVPL
LKKLKFSSRFAPAFSQIFGRTVICRDLEVATKVARTDSLDCITLEGDQVSKKGGMTGGFY
DYRRSKLKLMNIIRQNTKAINSKQDELAKVRSSVQEIDQRITTIVGDQQKMDAKRGHHKS
ELEQLKHDIANATKQRTSISKSLEKKKKLLATARNQIDQLKAGMAMKRAEMGTDLIDQLT
PEEKALLSRLNPEITQLKEKHLMCKRARIETETRRSELETNLSTNLVRRQQELEAQLAIA
DSESLSTELELKRQELRDAKASVDDATQQLKAITDQIDKYTKQIREMKSGKDELKALEDN
YERTLQDEAKDLEQLLNKRNLLQGKREEFMKKIRDLGSLPSDAFEKNKRKNLKELHKMLH
KCNENLKKFSHVNKKALDQYVNFTEQREELHKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVAKNFREAFAELVPGGHGSLVMKKKKAGEVDDDDPDDDGNRDMDSDARVEKYIGV
KVKVSFTGQGETQLMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIKRQADTASTQFITTTFRPELVKVADKIYGVTHKNRVSRVDVIKKEDALYFIEHDQS
HQQE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgttcataaagcaggtgatcattgaaggttttaaaagctacaaggagcaggtggcaaca
gagccatttagtccaaagcataactgtgtagttggtgccaatgggtcaggcaagacaaat
ttttttcatgcgatacggtttgtcttgagtgacctgttccacaatcttcgtgctgaagat
agacaagcacttttacatgaaggagcaggccatcaagtgttggcggcatttgtggaaatt
gtattcgacaacagtgacaatcgcattccagttgaccgggaagaagtacgcttgcgtagg
actattggtctgaaaaaggatgagtactttttggataagaaacatatcacgaaaactgaa
gttatgaatcttttagaaagtgctggattttcccgatcaaatccgtattatgttgtgcag
cagggaaagatagcttcgctaaccttaatgaaggattctgaacgattggatttgcttaaa
gaaatagggggaactcgtgtatatgaagaacgacggaaagaaagtttaaaaattatgcaa
gagactgaaaacaagaggaagcaaattattgaagttgttcagtacattgaggaaaggcta
aaagaacttgatgaagaaaaagaggagctgaagaaataccagcaattggacaagcagcgg
agatcactggagtacactatttttgagaaggaactccaagatgcaaaacagaaacttgag
gagattgaagaagctcgagctaaagtatctgaaaaatcaactagcatgtataatagtgtt
cttgaggcacatgagcgtttcaagacattggagaaagatctgaaaaacttaagcaaagaa
tctcaagctatgacaaaggaaaaggatgctgcagagaagcggaaaacggaaacaatgaaa
aggcatgcaaaagttgaactggatgttagagatttagaagagagaatcagtggagaagga
cgaatgaaggaagatgtagcaaaggagctaaagagcttggaaaaggaaattcagaaatca
agaaaagaactggaaaaggttaggcccttgcatgatcagcaattgctggaggaggaggag
ataactaggggcatcatggaacgagagaagcagctaagtatcttgtaccaaaaacaaggc
cgggcaactcaattttcaagcaaggctgctcgagacaaatggttgcaaaaagagattgat
gatctgcagcgtgtactttcatcaactatggctcaggaacaaaagctgcgggaggagata
gaacaactcaatcaggagtttgaagagcaggagaaaagcatagaggctcgatcagtagaa
ctgaaggaacaagaatctgatatttctaagtgccaaggagagttcgctagtttgaaaatt
gagagggatggattacaagagactagaaagaaactgtggaaacaggaaaatgaactcgca
tctgaaattgataagctgaaatcagaaattgcaaaggcagaaaaaagcttagatcatgct
gctcctggggatataagacggggccttaattcaataagaagaatttgcagggatcacagc
atccctggtgtctttggtccaatctgtgaattgcttgattgtgatgagaaatttttcact
gctgttgaagtgactgcaggaaatagcttgtttcatgttgtagttgagtcagatgagatc
tcaaccagaattattagataccttactgctgagaaaggtggaagagtgacttttatgcct
ttgaatcgtgtgagagctccgcaagttgcttatccacataatccagatattgttcctctt
ttgaaaaagctaaagttctcttcacgatttgcgcctgccttttcccagatttttgggaga
actgtcatttgtcgcgatctggaggtggctacaaaggttgctcgaactgattcattggat
tgtatcactttggaaggtgatcaagtgagcaaaaaaggtggcatgacaggaggcttttat
gactacaggcgatcaaaattaaagcttatgaacattattcggcaaaatacaaaggctatc
aattcaaagcaagatgaacttgcaaaagtccggagctctgttcaagagatagaccagagg
atcacaacaattgttggtgatcagcagaaaatggatgctaaaagaggtcatcataaatct
gagttagagcagcttaagcatgatattgctaatgcaacaaaacagcgcacatctatctct
aagtctcttgaaaaaaagaaaaagcttcttgcaactgctcgtaaccaaattgatcagctt
aaagcaggcatggccatgaaacgagctgaaatgggtacagaccttattgatcagttgacc
ccagaagagaaggctcttctttctcgtctaaaccctgaaattacacagctcaaagagaaa
catcttatgtgcaagagagctcgaattgagacagaaacaaggaggagtgaacttgaaaca
aatctatcaacaaatcttgtcaggcgacaacaagagttggaagcccaacttgcaattgct
gattcagaatctttgtcgactgagcttgagcttaaaaggcaggagctacgagatgcaaag
gcatctgttgatgatgcaactcagcaattaaaagcaatcacggaccaaatagacaagtac
acaaaacaaataagagaaatgaaaagtggaaaagatgaattgaaggctctagaagacaat
tatgaacggacacttcaggatgaagcaaaagatcttgaacaacttctgaataaaagaaac
cttcttcagggaaaacgagaagaattcatgaagaaaatccgcgacttaggttcattgcca
tcagatgcatttgaaaagaacaagcgcaagaatttaaaagaattgcacaaaatgcttcac
aaatgcaatgagaaccttaaaaagttcagtcatgtcaacaagaaagcattggatcagtat
gtcaatttcacagaacaaagagaagagctacataagagacaggctgagcttgatgctggt
gatgagaaaattagggaattaatctcagtgctagaccaacgtaaagatgaatctattgag
aggacattcaaaggagtggccaaaaactttcgtgaagcttttgctgagcttgtaccaggt
ggtcatggttccctagtaatgaagaaaaagaaggctggtgaggtcgacgatgatgatcct
gatgatgatggaaatcgagatatggactctgatgcaagggtagagaagtacattggagtc
aaagtgaaggtatcttttaccgggcaaggtgagactcaattaatgaaacaattatctggt
ggtcagaaaacagttgtagccttgacactgatctttgcaatccagcggtgtgatcctgct
ccattttatctttttgatgaaatcgatgcagcactagatccccagtacagaactgcagtt
ggtaatatgataaaacgacaggcagacactgcaagcacacaattcataactactacattc
aggcctgagcttgtgaaagttgcagataagatatatggtgtcacacataaaaacagggta
agccgtgttgatgtgattaaaaaagaagatgcactatacttcattgaacatgatcagagc
caccagcaagagtaa
DBGET
integrated database retrieval system
