Cryptomeria japonica (Japanese cedar): 131066723
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Entry
131066723 CDS
T10556
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131066723
Enzymes [BR:
cjf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
131066723
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131066723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
131066723
NCBI-ProteinID:
XP_057857534
LinkDB
All DBs
Position
9:642829017..642969467
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AA seq
462 aa
AA seq
DB search
MVEEERNKIVWETPENPPKRDDYIFHHGKRMVRPYYFEFIAHVKKRWAGKKVVDLFSHEF
RQRPYEYYVEAVKSGRICVDGKLVSDEYVVKASQTLSHFVHRHEPPVMAEPIMILDETSD
VITVCKPSSIPVHPCGQYRKNTVIGILEAEHGIAPLFPIHRLDRLVSGLLILAKNAASAN
QFRQEIEAGKVQKEYVAKVKGVFPAEEVEVDANVFYDAREGKSTTEVVDGSNKQPGKGKA
AHTKFVRLGTNGIFSIVKCLPVSGRTHQIRVHLQHLGHPIANDALYSVENPPDRSIEGTS
SDRAARRRQTLVSELGQSELCSSGLSKQCNSREEAGIVFDEDLNEGNPSTDSKSRGNAVD
DLAGTIKRQKVEGKSIMNKRPANCSMGDPSIDFQKGDANADERLSMHGCEKMYLKIDSMC
TNCPNVAPSGYDEHEDGLLLHCVRYSGPNWAYECPSPQWALI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagaggaaagaaataagattgtttgggaaactccagaaaaccctcctaaacgt
gatgactacatttttcatcatgggaagcgaatggtgcggccttattactttgaattcatt
gctcatgttaagaaaagatgggctggaaagaaagtagtggatttgttttcacacgagttt
agacaacggccttatgaatattatgttgaggctgtaaaatcaggaagaatttgcgttgat
ggcaaattagtgtcagatgaatatgttgttaaagcttcccagacacttagtcattttgtt
cacaggcatgaacctcctgtgatggcagagccaatcatgattttggatgaaacaagtgat
gttattaccgtttgcaagccttcatctattcctgtacatccatgtgggcaatatcgcaag
aacacagttattggcattttagaggcagagcatgggattgctcctttgttcccaatacat
cgactagatagattggtctctgggcttctcatcttagccaagaatgctgcctcagctaac
cagtttcgacaggagattgaggccgggaaagtgcaaaaagaatatgttgcaaaggtcaaa
ggtgtatttcctgctgaagaggttgaagttgatgcaaatgtattctatgatgctcgagaa
gggaagagcacaacagaggtggttgatggcagtaacaagcaacctggcaaggggaaagca
gcccacacaaagtttgtaagacttggtacaaatggaattttcagtatcgtcaagtgctta
cctgtaagtggtcggacacatcagatccgtgttcatctgcaacatttgggtcatcctata
gccaatgatgcactctactctgtggagaatcctcctgaccggtctatagaaggaacaagt
tctgatcgggctgctaggaggaggcagacacttgtgtctgaattgggtcaatcagagctg
tgttccagtggtctatctaagcagtgtaatagccgtgaagaagctggcattgtgtttgat
gaagaccttaatgaaggaaacccatctacagattccaagtcaaggggaaatgcagttgat
gatttagcagggaccatcaagagacaaaaagtggaaggaaaatcaataatgaacaagaga
ccagcaaattgttcaatgggagatccttccattgattttcagaaaggggatgcaaatgct
gatgaaaggcttagtatgcatggttgtgagaaaatgtatctgaagatcgattcaatgtgt
acaaattgtcccaatgtggctccatctggctatgatgaacatgaggatggactattgttg
cattgtgttcgatattctggaccaaactgggcctacgagtgtccctcacctcaatgggct
ctcatctga
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