Cryptomeria japonica (Japanese cedar): 131066821
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Entry
131066821 CDS
T10556
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131066821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131066821
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131066821
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
131066821
NCBI-ProteinID:
XP_057857660
LinkDB
All DBs
Position
3:262130947..262139436
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AA seq
566 aa
AA seq
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MPSFPDEVLEHVLVFLTSSQDRNSVSLVCKTWYRAEAWGRKSIFIRNMYAVSAEAVVRRF
PRLRSITLKGKPRFADFNLVPPNWGADVLPWIHTIASVNPMLEELRLKRMVVTDESLELL
AHFFPNFRALSLTSCEGFSTNGLAIIASKCRNLTELDLQENDIDDRGGYWLSCFPESCSS
LVSLNFACLNSEVNFDVLERLVARCKCLKSLKLNKNVTLEQLQRLLVRAPQLTELGTGSY
SQELKSQQFSDLETAFSNCRDLRLLSGFWEVSSLYLSAINSVCVKLTFLNFSYATLQSWE
LGRLIVNCPHLQRLWVLDTVEDKGLETVSSSCKDLRELRVFPADPSGQGQGYVTEKGIVA
ISKGCPNLKYVLYFCRQMTNSAIVRVAHNCPMLTHFRLCIMDPHRPDHQTNEPMDEAFGA
IVKNCKNLQRLSLSGLLTDKTFEYLGLYAKNLQTLSVAFAGDSDKGMQYLLQGCPKLRKL
EIRDSPFGDAALLSGLDRYESMRSLWMSACHVTLNGCNILAQEMPKLNVEIIKENDEDDD
NRIEKLYVYRTLCGPRTDAPSFVYTL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccctcttttccagatgaggtccttgaacatgttctggtgttcctcacctcctcacag
gacagaaactctgtttctctggtttgcaagacatggtacagagcagaggcatgggggagg
aagagtatcttcatacggaatatgtatgcagtttcagcagaggctgtggtgaggaggttt
cccagactgaggtctattactctcaaggggaagccgaggtttgcagatttcaatctggta
ccacctaattggggagctgatgttcttccctggattcataccatagcctctgtaaatcca
atgctggaggaactgaggttgaagaggatggtggtgactgatgaaagcttggagctattg
gctcatttctttccaaactttcgtgctttgtctcttaccagctgtgaaggctttagtaca
aatggccttgccatcatagcaagtaaatgcaggaatcttacagagctggatttacaggaa
aatgacattgatgatcgaggaggctattggctaagttgttttccagagagctgttcatcg
ttggtgtcactaaattttgcttgtttaaacagtgaagtgaattttgatgtccttgagagg
cttgtagctagatgcaaatgtttgaaaagtttaaaacttaacaagaatgtgacactagaa
caattacagcgccttctggtgagagcacctcaattgactgaactgggtacaggttcgtac
tctcaagagcttaagtcacaacaattttcagatttggaaactgccttcagcaactgcagg
gatctgagactattatcgggattctgggaagtgtcatctctatatctttctgcaattaat
tccgtgtgtgtgaagctgacatttttgaactttagctatgccactctacaaagctgggag
ctggggagactcattgtaaattgtcctcatttacaacgattatgggttctagacactgtg
gaagacaagggacttgaaactgtgtcttcaagttgtaaggatttgagagaactgcgggtt
ttcccagcagatccttctgggcaaggtcaaggctatgttactgaaaagggcattgttgcc
atctctaagggatgtcctaatcttaaatatgttctatacttctgcaggcaaatgacaaat
agtgcaattgtcagagtagcacataactgcccgatgttgactcatttccgtctttgtatt
atggatccacatcggccagaccaccagacaaatgagcccatggatgaagcttttggagca
attgtaaagaattgtaagaatttgcagcgcttgtcattatcgggtttgcttactgataag
acttttgaatatcttggcctttatgcaaagaacttgcaaactttatctgtggcttttgct
ggagatagtgataagggtatgcaatatttgttacaaggttgcccaaagctccgaaagctt
gagataagggatagtccgtttggggatgctgcactgctatcaggacttgaccgatatgag
tcaatgcgctcattatggatgtcagcatgccatgtcacactgaatggttgcaatatcctt
gcacaggagatgcctaaacttaatgttgaaataattaaggaaaatgatgaagatgatgac
aacaggattgagaaattatatgtttatcggactctttgtgggccaagaacagatgctcca
agttttgtatacacattgtga
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