KEGG   Cryptomeria japonica (Japanese cedar): 131066860
Entry
131066860         CDS       T10556                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
  KO
K07466  replication factor A1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030  DNA replication
cjf03420  Nucleotide excision repair
cjf03430  Mismatch repair
cjf03440  Homologous recombination
cjf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131066860
   03420 Nucleotide excision repair
    131066860
   03430 Mismatch repair
    131066860
   03440 Homologous recombination
    131066860
   03460 Fanconi anemia pathway
    131066860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cjf03000]
    131066860
   03032 DNA replication proteins [BR:cjf03032]
    131066860
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131066860
Transcription factors [BR:cjf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    131066860
DNA replication proteins [BR:cjf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    131066860
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     131066860
   MMR (mismatch excision repair)
     131066860
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     131066860
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 CDC24_OB3 OB_MEIOB_N RNase_P-MRP_p29 POT1
Other DBs
NCBI-GeneID: 131066860
NCBI-ProteinID: XP_059075190
LinkDB
Position
4:complement(474408121..474430313)
AA seq 362 aa
MEEKKRLSLVNWDIVCLPKSMGGLGIKKINALNKDLIAKVGWTLAKGQPDWCNIIKAKYL
ERAEFCCCIKEADTKWNKLNSHLEITLDSNSVLKRCDVVIDSQGNNSRFTPINEITYYTN
NTLVDVIGIVVDVGEPSLILRKDGSEVTKRIVKINDVSTFTINVNLWGATWQGVGEDLKN
MHATQTVVVLAVRNARVGYFNGKVINSTTTTTLAINPSIPKTETLISRGNIPDDLLPLSC
VAGQLNSQYNRMTITVVLERTSVLSKTVETTIRAIVRIIKTDSFCYPACPLKINGKECKK
KCVQQNDNVWFCSRCQTHVPECNYKYLLQMKLQDHTCTLWAIAFDEVGTNLLQISAKDLY
ML
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaggaaaagaaacgcctctctttggtcaattgggacattgtttgcttacccaaatcc
atgggaggtcttggtatcaaaaagataaatgccttgaacaaggatttaattgctaaagtg
ggatggaccctagctaaaggtcagccagactggtgtaacattatcaaggccaagtatttg
gaaagggcagaattctgttgttgcattaaagaagctgacacaaaatggaacaagcttaac
agtcatcttgagataactttggacagcaattcagtattgaagcgttgtgatgttgttatt
gatagtcaaggaaataattcgcgattcacaccgattaatgaaattacatactacaccaac
aacactttagttgatgttattggtattgtagttgatgttggagaaccctcattaattctt
agaaaagatggcagcgaagtaacaaagagaattgtcaaaataaatgatgtctcaactttt
actatcaatgttaacttatggggagcaacatggcaaggggtaggtgaagatttgaagaac
atgcatgcaacccaaacagttgttgtccttgcagtcagaaatgctcgggttggttatttc
aatggaaaggttattaactcaaccacaacaacaactttagctataaacccttctatccct
aaaacagagacacttatatcaagaggaaatattccagatgaccttttaccactgtcttgt
gttgccggacaacttaactcacaatacaacaggatgacaatcacagttgttttagaacgt
acaagtgttctctctaaaacagttgaaactactattagggctattgtgagaatcattaaa
actgattctttttgctatccagcctgccctttgaaaattaatggcaaagagtgtaaaaag
aaatgtgtccagcaaaatgataatgtatggttttgttcaagatgccaaactcatgtgcca
gaatgcaattacaaatacttattgcaaatgaagctccaagatcatacatgcactctttgg
gctattgcctttgatgaggttggcacaaatttgctgcaaatatctgccaaggacctttac
atgctgtag

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