KEGG   Cryptomeria japonica (Japanese cedar): 131067128
Entry
131067128         CDS       T10556                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
  KO
K07466  replication factor A1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030  DNA replication
cjf03420  Nucleotide excision repair
cjf03430  Mismatch repair
cjf03440  Homologous recombination
cjf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131067128
   03420 Nucleotide excision repair
    131067128
   03430 Mismatch repair
    131067128
   03440 Homologous recombination
    131067128
   03460 Fanconi anemia pathway
    131067128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cjf03000]
    131067128
   03032 DNA replication proteins [BR:cjf03032]
    131067128
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131067128
Transcription factors [BR:cjf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    131067128
DNA replication proteins [BR:cjf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    131067128
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     131067128
   MMR (mismatch excision repair)
     131067128
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     131067128
SSDB
Motif
Pfam: REPA_OB_2 tRNA_anti-codon OB_MEIOB_N DUF223 SH3_Rv0428c
Other DBs
NCBI-GeneID: 131067128
NCBI-ProteinID: XP_057858042
LinkDB
Position
11:700150508..700151476
AA seq 322 aa
MIEEPVSLDANQYCQMDQVAQLTPTLNIGVENLHNSGTLSQTKVLFGVKRPQSSSGVLSI
ITPIKNLNPFQTRWIIKVCVTIKKEIHQYNKQTGNGRVFSFNIIDSEGTKTRVSSFNNMA
DAHYGNIDIGAAYKISGGVVKTANKIYKKLNSGIEITLVPESIVTPCEDDPSIPKNHFSF
MPINEILEQSNNSVIDVIGVVICVEPSLTIRKRDGTEVIRRAIKLLDMSQTTIEVTIWGA
PSEKEGVQLQQKYYLQETTILAIKSGCVCEYNGKVLSTSSNTHLILNPVILEADKLRTWF
DQTVSDTHEPSVKYASLPKPIT
NT seq 969 nt   +upstreamnt  +downstreamnt
atgattgaggaaccagtctcccttgatgcaaaccagtactgccagatggatcaagtggca
caactcacccctactttgaatattggagtagaaaacctccacaattcagggacactctct
cagacgaaagtactatttggagtaaagcgaccccaaagttcaagtggggtattgagcata
attacacctataaagaacttgaatccattccaaacaaggtggattatcaaagtttgtgtg
actataaagaaagaaattcatcaatacaataagcaaacaggaaatggtcgagtgtttagc
ttcaacatcatagatagtgaagggacaaagacacgtgtatctagttttaacaatatggca
gatgcacattatggtaatatagacattggagctgcatataagatttcaggtggggttgtg
aaaactgctaataaaatttataaaaaacttaacagtgggatagaaataactcttgtgcct
gaatcaatagtaaccccctgtgaagatgacccttccattccaaaaaaccatttctcattc
atgcctattaatgaaatacttgagcaaagtaataattcagtcattgatgttattggtgtt
gttatttgtgtagaaccaagcttaacaatcagaaaaagagatggaacagaggtcataagg
cgtgccataaagctactggatatgtctcaaactacaatagaagttacgatatggggagca
ccatctgagaaagaaggtgtccaactgcaacaaaaatactaccttcaagagacaacaatc
ctagcaatcaagagtggatgtgtttgtgaatataatggaaaggtattgagtacatcaagt
aatacacacctaattctaaacccagtgatattagaagctgataaattaagaacctggttt
gaccaaactgtaagtgacacacatgaaccttcggtcaagtatgctagtttacccaagcca
attacatga

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