Cryptomeria japonica (Japanese cedar): 131067168
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Entry
131067168 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131067168
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131067168
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131067168
MMR (mismatch excision repair)
131067168
DSBR (double strand breaks repair)
HR (homologous recombination)
131067168
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131067168
NCBI-ProteinID:
XP_057858100
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Position
3:338831891..338834083
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AA seq
607 aa
AA seq
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MASSTATSESIDHSTIDNLAKNQEYVPTPFAIQSINARDDLPSTLLQVLSFQKMQNNTDD
TDRHKLVLSDGKYMQLAILPSKYATLIDSDILKIGTIVQLSSYTCQYIWNTRTIIILSLE
VKQSVCPFFGKPEYLFKEQQPKIMSEDKPSTSKRSLQFATELPSPQATTSENISPIKTLN
PYQNKWTIKGKVTHKWPIKAYSTATKNGHVFSFDIVDCDGSEIRITCFDEIAKLHYNHVD
LGSHYIISKGSVEEANARYNKLNSHLEITLSNISIVKRCTNEEQADQQTAPFTPIGELFQ
LTNSTLVDVIGLVLYVGDIIPIHRKDGSQTQKRVVKINDLSGSTIDINLWGPIAEQKGLE
LKNMLTNDSVVILALRNAHVGYFNGKLVNITVATTLHINPSFPEADLLTSRGKDPLLVVP
FVAKTIHIDGKYTRMTISSIHEWMSIKPETIQTTLLAILRYVNVNDQNFYYTACPLIVNG
RPCKKKCTQQADGSWFCSRCQMSMQDYNYSYLLRLKLQDAIGTLWATAFDEGGNHLLHKT
ARQLYALQNDAATTKTPSSVMKRVLSHYYSFTLLVSTETYNSGSKMKVTVNKVAPVDFKA
ECHALLA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcaacagctacctctgaatccatagaccattccactattgataatttggca
aaaaaccaagagtatgtccctaccccttttgcaatccaatctatcaatgctagggatgac
cttccttcaacattgctacaagttttgtcatttcagaaaatgcagaacaacacagatgat
actgacagacataaattagtgttatctgatggaaaatacatgcagttggcaatcttgcct
tctaaatatgctactctgatagattcagatattctaaaaataggcacaatagtccagtta
tcgagctatacatgccaatacatatggaacacaaggactatcataatacttagtctagaa
gtgaaacaaagtgtttgcccattctttggaaaaccagaatatctattcaaagaacaacaa
ccaaaaattatgtctgaggacaaaccatcaacatctaaacggtcgcttcagtttgcaact
gaattgccatccccacaagcaacaacttctgaaaatataagtcctataaaaactttgaat
ccataccaaaataaatggacaatcaaagggaaagttactcataaatggcctattaaggca
tatagcacagccaccaaaaatggccatgtctttagctttgacattgttgattgtgatggt
tctgaaattcgaattacatgttttgatgagatagctaagttacactataaccatgtggac
ttaggttcacattatattatttcaaaaggatctgttgaggaggcaaatgcaaggtacaac
aaactaaacagtcatttagaaatcaccttgtctaatatatccatagtaaaacgttgcacc
aacgaagaacaagcagatcaacaaactgctcctttcacacctattggtgaattgtttcaa
ctaacaaacagtacactggttgacgttattggtcttgttctatatgttggagatatcatt
cctattcacaggaaagatggcagtcaaacacaaaaacgtgtcgtgaaaattaatgatcta
tctggttcaacaattgacatcaacttatggggcccaatagcagaacaaaagggcctggaa
ttgaaaaatatgttgaccaatgatagtgtggtaatccttgctttacgtaatgctcatgtt
ggctatttcaatggcaagcttgtaaacataacagttgcaacaacattacatatcaaccca
agttttccagaagcagaccttctaacatcaagaggaaaggaccctttgcttgttgtaccc
tttgttgcaaaaactatccacatagatggcaaatatactagaatgacaatctcttcgatc
catgagtggatgagcatcaaaccagaaacaattcagacaacattgctagctattttacgc
tatgtcaacgtcaatgaccaaaatttctattacacagcttgcccactgatagtcaatgga
aggccttgcaagaaaaaatgtacacagcaagctgatggttcttggttctgctctagatgt
caaatgagtatgcaagactataattatagttacctcttgcgtctaaagttgcaagatgcc
ataggtactctatgggccactgcatttgatgagggtggcaatcacttgctacacaaaact
gcaagacaactctatgcactacaaaacgatgcagcaacaacaaagacaccttcctcagta
atgaagagagtattgtcacattactattcattcacactgctggtttctactgagacatac
aattcaggatccaagatgaaagtgacggtcaataaagttgctcctgttgacttcaaagct
gagtgccatgcactgcttgcataa
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