Cryptomeria japonica (Japanese cedar): 131067226
Help
Entry
131067226 CDS
T10556
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X2
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjf03032
]
131067226
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131067226
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
131067226
DNA replication proteins [BR:
cjf03032
]
Prokaryotic type
DNA Topoisomerases
131067226
DNA repair and recombination proteins [BR:
cjf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
131067226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HTH_37
Motif
Other DBs
NCBI-GeneID:
131067226
NCBI-ProteinID:
XP_057858166
LinkDB
All DBs
Position
3:complement(234003024..234228243)
Genome browser
AA seq
944 aa
AA seq
DB search
MALSTRFLHRLPLISFSLYRSSPAFLILRKCQSQRRLFAVRSQTARFLHVSSGENELGRR
MKIQATSMEEVAEDGDGGEEPPENGALFERPLDERIVAVELHKEATDSYLAYAMSVLFGR
ALPDVRDGLKPVHRRILFAMHELGLSSRRPYKKCARVVGEVLGKFHPHGDTAVYDALVRM
AQGFSLRSPLISGHGNFGSVDADPPAAMRYTEARLEAFSEATLLADLEFDTVDFVANFDG
SQMEPSLLPARLPHVLLNGASGIAVGMATNIPPHNLREVTDALIALIHNPAATVQQLMEY
MPGPDFPTGGKIMGDIGILEAYRTGRGSLIVRGKTNVELLNKKTNISAIIITELPYQTNK
ASLVEKIAQLVDDKELEGISSIRDESDRTGMRVVLELKRGVEPSIILNNLYKSTALQSSF
SCNMVGILGGRPKLMGLKDMLEAFLEFRCSVVERRAKFLLKVAEERDHIVKGILIGLGNL
DRIISLIRESRSHSETITALKEGYSLSEKQAEAILNITLRKLTSLERNKFMEEHKSLSGE
ITNLIELLGDRNRILQVIEKEALELKEKFGTPRRSVLEEGVSGELDELDVIPNEEVLLAL
SKKGYMKRMKPDVFNLQNRGTVGKSIGKLKQDDSMSEFVMCRAHDHVLYFSNKGTAYAAR
AFRVPECSRTATGIPLLRILSLSPEEKITSIIPVSEFRADQYLVMLTAKGYIKRVSLDVF
SSIRSSGIIAIQLVPGDELKWARCCAAGDLIAVGSQNGKLVLSYCERIRKTSRTSRGSLS
MRLKGEDKLAAMDIVPVSLQQRLQDILQSSEHQGKIISAPWLLLVSENGYGKRVPLSKFR
ATTLRCIGVMGYKLPAEDRVAALFVVGFSLSDDGESDEQVALVSHSGTLNRIMIRDIRIC
SQSARGVRLMRLEEGGKIQSASILAASEVNTDDFQDLELQDVSS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtcaacacgtttcttgcatcgtcttccgttaatctcattttctctctaccgt
tcatctcccgcctttttaatccttcgaaaatgtcagtcccagcgcagactgttcgccgtg
cgctctcagactgctcgcttcttacacgtctcttctggtgaaaatgaactcggtagacgc
atgaaaattcaggcgacgagcatggaagaagttgcggaggatggtgatggcggtgaagag
ccgccggaaaatggagctttgtttgaacggccactggatgagagaattgtggctgttgag
cttcacaaagaggcaactgactcgtatttggcgtatgcgatgtctgttttgtttggacgc
gctttgcccgacgtaagggatggattgaaacctgttcatcgtcgaatactatttgcaatg
catgaactgggtctttcttcaagaagaccctacaagaaatgtgcaagagtagtgggagag
gttctaggaaagtttcatccccatggagacactgcggtttacgatgctctggttcgaatg
gcacagggattctctttgcgatctcctctaattagtggccatggaaattttggatcagtt
gatgcagatcctcctgctgccatgcgatatacagaagcaagattagaagcattttctgag
gccacgcttctggcagacctggaatttgatacggtagattttgtggcaaattttgatggt
tcacagatggagccatccttgctacctgcaaggcttccacatgttctgcttaatggtgca
tcaggaatagctgttggcatggcaaccaatatacctcctcacaatcttagagaggttaca
gatgcattgattgctcttatccacaatcctgctgccacggtccaacaactgatggaatac
atgcctgggcctgatttcccaactggtggaaaaatcatgggggacattgggattttagaa
gcatatagaacaggtcgaggaagcttgatagtaagaggaaagacaaatgttgagctgctt
aacaaaaagactaatatctctgccatcattattactgagctcccttatcagactaacaag
gcatcattggtggaaaaaattgcccagctagttgatgataaggagttagaaggtattagt
agtattcgagatgagagtgatcgtacaggaatgcgggttgtattagagttgaaaagaggt
gtagaaccatctattatcttaaataatctttataagagcacggcacttcaatcaagcttt
agctgtaacatggtgggaattctgggtggacgtcctaaactgatgggattaaaagatatg
cttgaggctttcctagaatttagatgctccgtagttgaaagacgtgcaaagtttcttttg
aaagtggctgaagaaagagatcatattgtgaagggcattttaataggcttgggcaacctg
gaccgaatcatcagtcttattagggaatctcgaagtcattctgaaacaatcactgctctc
aaggaaggatatagtctatcggaaaaacaagctgaggcaatcttaaatatcactcttaga
aagcttacatcacttgagcgaaacaagtttatggaggagcacaaatcactgagtggagaa
atcacaaacttaatagagcttttaggagaccgaaatagaattttacaggttatagaaaaa
gaagcactggaattgaaggagaagtttggaacacccagaagatcagtattagaggaggga
gtaagtggagaactagatgaactcgatgtaattccaaatgaggaagttcttttggccctc
agcaagaagggttatatgaagcgcatgaagcctgacgtattcaacctacaaaaccgtgga
actgttggaaaatcaatagggaaattgaagcaagacgattctatgtcagaatttgtcatg
tgccgtgcccatgatcatgtactctatttcagtaacaagggtacagcgtacgctgcacgt
gctttccgagtaccagagtgctcacgaactgctacaggaatcccacttttgcggatacta
tcattatccccggaggagaaaataacttctatcataccagtcagtgaattcagggcagat
caatatcttgtgatgttaactgccaaaggatatattaagagagtctccttagatgttttt
tcatctatcagatcctcaggaattattgcaatccaactggtacctggggacgagcttaaa
tgggcaagatgctgtgctgcgggtgaccttattgctgtgggttcccaaaatgggaaactt
gttttgagttactgtgagaggatccgaaaaacgagtagaacgtcaaggggatcgctgtca
atgagattgaagggggaagacaaacttgcggctatggatattgtaccagtttctttgcag
caaaggctacaagacattttacagagctcagaacatcaagggaaaattataagtgcacca
tggcttctccttgtgtcagagaatggatatggaaagcgtgtacctttaagtaaatttcga
gctacaactcttaggtgtattggagtgatgggctacaagctgccagctgaagatcgtgtt
gctgcattatttgttgttggattttccctgtcagatgatggtgaaagtgatgaacaagtt
gctcttgtgagccatagtggtactttgaacagaatcatgatcagagatatccgaatctgt
agccaatctgcgaggggagtgagacttatgagattggaagaaggtggcaagattcaatca
gcctctatattggcagcttctgaagtcaacacagatgattttcaagatttggaacttcaa
gatgtttcttcttag
DBGET
integrated database retrieval system
