KEGG   Cryptomeria japonica (Japanese cedar): 131067286
Entry
131067286         CDS       T10556                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cjf03016]
    131067286
Enzymes [BR:cjf01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     131067286
Transfer RNA biogenesis [BR:cjf03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    131067286
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 DUF5428
Other DBs
NCBI-GeneID: 131067286
NCBI-ProteinID: XP_057858227
LinkDB
Position
5:complement(106928677..106977854)
AA seq 710 aa
MEAQVTEVLPSEDMSDHMGVDIDKANANEVGSACLAKSGEGGEILDYPSAEELVSKARAP
VKKEYVRAAPAVRPINECKKVSTEKKSKRQLKRERQQERKSAQNICVAVAKAGDIKACNY
GDNCRLSHDLEGFLAQKPPDLPGKCPFIYKTEPCQYGVACRYAGTHKERDSLQVENALSD
ASFEMNSLVKDLQKLIWKNAVTFPKAEEQLKNLGILEKGKPKSGKTVEKHVAPDHVTEDE
SVDSPRVEKIDSESSVLSNKSSCPCLSGTENNEGGNNQNGDLPPSKKAKIEDDIVLRDIG
AGQITDGDDCQQKTDGVEDGSKSQSEHVKTKIDFDTFETDNDAKLNLREKKLIDFRGKLY
LAPLTTVGNLPFRRLCKLLGADITCGEMAMCSNLLQGQASEWALLRRHSSEDLFGVQVCG
AYPDIVARAVELIERECVVDFIDINMGCPIDIVVNKGAGSSLLTKPVKMQNVIKAAAATI
EKPLTVKVRTGYFEGRNLVHSRILDISKSGAAAITIHGRTRQQRYSKLANWDYINECAQQ
APDDLQVVGNGDISAYTDWNEHLNNGANLSTCMVARGALVKPWIFTEIKEQRHWDISSGE
RFDILKDYVRFALQHWGSDTKGVETTRHFLLEWLSYSCRYIPVGLLDIVPQRINWRPPSY
FGRNDLETLMASESAADWIRISEMLLGPAPAGFTFTPKHKSNAYDSTDNG
NT seq 2133 nt   +upstreamnt  +downstreamnt
atggaggcccaagtaacagaggtccttccctcagaagatatgtctgatcatatgggtgtt
gatattgataaagcaaatgcaaacgaagtgggttctgcttgtttggccaaatccggtgag
ggtggcgaaattttggattacccaagtgcagaagagttggtttccaaagccagggctcct
gtgaagaaggaatacgtgagggctgctcctgctgtaaggcctattaatgaatgcaagaaa
gtttctacagagaagaaatcgaaaaggcagcttaaaagagagaggcaacaggaaaggaaa
tcagcacaaaatatctgtgttgctgtggcgaaggcaggtgatatcaaagcatgcaattat
ggagataattgccgtttaagtcatgatctagaaggctttcttgctcagaaacctccagat
ctccctggaaagtgtccttttatatataaaacagaaccatgccaatatggagttgcttgt
cgatacgctggaactcataaagagcgtgattccttacaagtagagaatgccttaagtgat
gctagttttgagatgaatagtcttgtcaaagatttgcaaaagcttatttggaaaaatgct
gtaacattcccaaaggcagaagagcaacttaaaaacctggggattctggaaaaaggtaaa
ccaaagtcaggcaaaacggttgaaaaacatgttgctcctgatcatgttacagaggacgag
tctgttgattctccaagggttgagaaaattgattcagaatcttctgttctatccaacaaa
agtagctgcccgtgcttatctggtactgaaaataacgaggggggaaataatcaaaatggt
gatcttccaccctcaaaaaaagcgaaaatagaagatgatattgttttaagggatattggt
gctggtcaaataactgatggagatgactgccagcagaaaacagatggtgtggaggatgga
agcaaatctcaatctgaacatgttaaaacaaagattgattttgatacatttgaaactgat
aatgatgccaaattgaatctgcgagagaagaagctcatagattttagaggaaagctgtat
cttgctcctcttacaacagttggaaatcttcctttccgaagattgtgtaagcttttagga
gcagatatcacttgtggtgaaatggcaatgtgttccaatcttttgcagggacaagcttca
gaatgggcattattaagacgtcattccagtgaagatttgtttggggtacaagtttgtggt
gcatatccagatattgttgcacgtgcagtggaactcattgagcgggagtgtgttgttgac
tttattgacattaacatgggatgtccaatagacattgtggtaaacaagggagctggttct
tctcttcttaccaagcctgtaaaaatgcagaatgtaataaaagctgctgctgcaaccata
gaaaaacctctcacagtcaaggtgcggacaggctattttgaagggaggaacctggtccat
tcacgaattttagatattagtaaatcaggagcagcagcaataactatacatggacgaact
cggcagcaacgctacagcaagcttgcaaactgggattacattaatgagtgtgcacaacaa
gcacctgatgatctgcaggttgttggtaatggagatatttctgcttacacagattggaat
gagcatttgaataatggggcaaatctctcaacatgcatggttgctcgaggagctttagtc
aagccatggatattcacggaaatcaaggaacaaaggcattgggacataagttctggggag
aggtttgacattttaaaagattatgtacgttttgcacttcagcattggggatctgataca
aaaggcgtggaaactacccgtcattttctattggagtggcttagctattcatgtaggtat
ataccagtgggcctcctggatattgtaccacagcgaataaactggaggcctccaagctat
tttggaaggaatgatcttgaaacattgatggcttcagagagcgcagctgattggattcgt
atttctgagatgttgctggggcctgctccagcaggattcacttttacaccaaaacacaag
tcaaatgcatatgacagtacagataatggttaa

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