KEGG   Cryptomeria japonica (Japanese cedar): 131067407
Entry
131067407         CDS       T10556                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131067407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131067407
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131067407
 Complex B
    131067407
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus DUF2397 zf-CCCH_4
Other DBs
NCBI-GeneID: 131067407
NCBI-ProteinID: XP_057858376
LinkDB
Position
9:727157455..727173892
AA seq 311 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTLLLSNMYQRPDMVTP
GMDPQGHAMDPRKIQEHFEDFYEDLFEELSKHGEIESLNVCDNLADHMVGNVYVQFREEE
HAAAALRALTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL
RRQLFGRYRRYYSHSRSRSISNSPTRSMERHCGYNDRPHGGRGHGRRDDDRDYHDDRHGR
RPRSRSPGHRRGRSRSRSPKRNRSPIRGGSAERRAKIEQWNREREQAAAAANAYVSSRNG
DGYSYQSGYGY
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcagaacatttagcatcaatatttggtactgagaaagatagggtcaattgccctttc
tattttaaaatcggagcctgcaggcatggggatcgatgttcacgtttgcacacaaggcct
agcattagcccaactcttcttttatctaacatgtatcagagaccagatatggtgacccca
ggcatggatccacagggtcatgcaatggatcctcgaaagattcaggaacattttgaggat
ttctatgaagatttatttgaggagctcagcaagcatggcgagattgaaagccttaatgtt
tgtgacaacttagcagatcacatggttggtaatgtatatgtgcaattcagggaagaggaa
catgctgctgcagctctgagagctttgactggcagattttatgcaggacggccaatcata
gttgatttctctcctgtcaccgactttcgcgaagctacttgcaggcaatatgaagagaat
acatgcaaccgtggtggatattgtaacttcatgcaccttaagaagatcagcagagagttg
cggagacaactttttggaaggtacagacgatactacagccacagtagaagtcggagtata
agtaacagccctacaaggtccatggagcgacattgtggctataatgatcgccctcatggt
ggtcgaggtcatggtaggagggatgatgacagagattatcatgatgatcgccatggtcga
aggccacggagcagaagtccaggccatcgacgaggccggagcaggagtcgcagccccaag
aggaacagaagtccaatccgaggaggaagtgctgagaggagagccaagattgaacagtgg
aacagagaaagagaacaagctgcagcagctgcgaatgcttatgtgtcatcacggaatgga
gatggatactcataccagtctggttatggttactag

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