Cryptomeria japonica (Japanese cedar): 131067459
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Entry
131067459 CDS
T10556
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131067459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131067459
03110 Chaperones and folding catalysts [BR:
cjf03110
]
131067459
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131067459
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131067459
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
131067459
Messenger RNA biogenesis [BR:
cjf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
131067459
Chaperones and folding catalysts [BR:
cjf03110
]
Heat shock proteins
HSP60 / Chaperonin
131067459
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
131067459
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131067459
Exosomal proteins of other body fluids (saliva and urine)
131067459
Exosomal proteins of breast cancer cells
131067459
Exosomal proteins of colorectal cancer cells
131067459
Exosomal proteins of bladder cancer cells
131067459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
131067459
NCBI-ProteinID:
XP_057858454
LinkDB
All DBs
Position
3:complement(499650394..499695418)
Genome browser
AA seq
596 aa
AA seq
DB search
MASNAISAHRNLASGLQSPQLTQVEKHKQRQLVRIKLNGGRKWTAVTLNASARAEIKEIA
FDEKSRSALQAGINKLVDTVGVTLGPRGRNVVLDNSGTPKVINDGVTIARAVDLPDAMEN
AGVALIREVASKTNDSAGDGTTTASVLAREIVNLGLLYVSSGSNPVSLKKGIDKTVRGLL
EELRRKSKPVKGRKDIKAVASISSGNDDFVGTMIADAIDKVGPDGVLYMDSSSSFETTVT
VEEGMKIDKGYISSRFVTNQGKLTVEFENARVLVTDQEIEREKDIIGVLEKIRQLGVPLL
LIAEEISGKAFSTLVINKMRGLIKVAAIKAPGYGDRKKSLLQDIAIMTGADFLAGELGYN
VENASIEQLGIARRITVTENSTTIIADAATKDEVQARIDQIKIELAKTDSSYLKEKLSER
IAKLSGGVAVIKVGASTEAELEDRKLKIEDAKNATFAAIEEGIVPGGGAAYVHLSSYVPF
IKESIDSPEERLGADIVQKALLAPAKLIANNAGVEGEIVVEKILSSSWEMGYNSMTNVYE
NLVGTGVVDPTKVVRCALENAASVAGMVLTTQAIVVDKIRKPEPKVPHVPGITDVI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaatgccatttctgcgcacagaaacctcgcctccggacttcaatctcctcaa
cttacgcaagtagagaagcataagcagaggcagctcgtgagaataaaattgaatggagga
agaaaatggacagcagtgacgttaaatgcgagcgcgagagctgagataaaggaaattgca
tttgatgagaaatctagaagcgctttgcaggcgggcattaacaaattggtggatactgtt
ggggtcactttgggacctagaggacgcaatgttgtcttagacaattctggaactccaaag
gtgattaatgatggagtcactattgctcgtgcagttgatcttcctgatgcaatggaaaat
gcaggagtagcattgatccgggaggttgctagcaagaccaatgattcagctggtgatgga
acaactacagcatctgttctggcaagagagattgtcaaccttgggcttctttatgtcagc
tcaggatctaatccagtttctctgaaaaagggaatagataaaacagtgcgagggcttctt
gaagagctgaggagaaagtccaaacctgtaaaaggacgaaaggatattaaagctgttgct
tcaatatcatcaggaaatgatgattttgttggaacaatgattgctgatgcaattgataaa
gttgggcctgatggagtgctgtacatggactcttcatcatcttttgaaaccactgttact
gttgaggagggaatgaagattgataagggttatatctcatctcggtttgtcactaaccaa
ggaaagttgactgtggagtttgagaatgccagagttttggtcacagaccaggaaattgaa
agagaaaaagatataattggtgtgctggaaaagatcagacagttgggtgttccattgctc
ctgattgcagaagaaatttcggggaaggctttttctacattggttataaataaaatgcgt
gggctaatcaaagttgcagccatcaaagctccaggatatggtgatagaaagaagtcttta
ctccaggatattgctataatgacaggagcggattttctggctggtgaactgggttataat
gtggagaatgcctctattgagcagctaggtattgcaaggagaattacagtaaccgaaaat
tcaaccaccattattgctgatgcagccaccaaagatgaagttcaggcaaggattgatcaa
atcaagattgaactagcaaagactgattcttcctatcttaaagagaaactatcggagaga
attgcaaagctctcaggaggagtagctgtcatcaaggttggagcttccactgaagctgaa
ctcgaggatagaaaacttaaaattgaggatgcaaagaatgcaacctttgcagctattgag
gaaggtattgtgccaggtggtggggctgcttatgtgcatctctcctcttatgtgccattt
ataaaagaatctattgatagccctgaagagcgtcttggtgctgacattgtacagaaggca
ctattggctcctgcaaaattgattgcaaataatgctggtgttgagggtgaaattgtagtg
gagaagattttatcttccagctgggagatgggatataattcaatgacaaatgtatatgaa
aatcttgttggtactggagtcgttgaccctaccaaggttgttagatgtgctctagagaat
gcagcttcagttgcgggcatggtccttacaactcaggcgattgtagttgacaaaatcagg
aaaccagaacctaaagttccccatgttcctgggatcactgatgtaatttga
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