Cryptomeria japonica (Japanese cedar): 131067466
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Entry
131067466 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131067466
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
HECT type E3
131067466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131067466
NCBI-ProteinID:
XP_057858474
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Position
3:complement(502606682..502674505)
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AA seq
1884 aa
AA seq
DB search
METRSRKRAEASAPPHSSSRRASKRARLCVSSSISTTTPSHPQSRSQSQFRTNSRRQEGM
DSSSASASASRRDSGGKNWNYGDSKRERDSGDKGKEKERERERERERERERERVREAMEE
EENEEEEENGGGSNNSNSILHQNLTSASSALQGLLRKLGAGLDDLLPGGSHGGSGGGSGS
HGRVKRILSGLRADGEEGRQVEALSQLCEMVSIGTEESLSSLAVDAFVPVLVGLVNHETN
ADIMLLAARALTHLCDVLPSSCAAVVHYGAVPSFCARLLTIEYMDLAEQSLQALEKISHE
HPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLH
YHDSKVLEHASVCLTRIAESFASSPEKLDELCNHGLVAQTTRLVSVSSSGGAQASLSTPT
YTGLIRLLSTCASGSTLATKTLLVLGISSILKDILAGSGSISSISVSPALNRPPEQMYEI
VSLVNELLPLLPQGTISLPTSCGIKSKVSLGKQTFGSNSTKQEDINGNIPEISSREKLFH
DQPELLQQFGMDLFPVLVQVYGSSVNAPVRHMCLSVISKLMYFSTSDMLQSLLRVTNISS
FLAGILAWKDPQVLVPALQMAEVLMQKLPDTFSKMFVREGVVHAVDTLILSNQPSTISMH
TGKDQDRLTGAMAKHRRNKRPSGGSNSEMNGIEEPKVSATAGDASIPTFNTGLRAAVSAH
AKRFKDKYFPAVSGPADAGVTERLCILKTLCMKLNGNLLDSKRKSKGKGKAVGHISASND
EQCLNVIVDILEQLSKGDGVSTFEFIGSGVVESLLNYFSCTTLSREGMLEADFMKLHQQA
LRRFTLFVEVALPLNNEGKEAPMKFLVNKLQDALASLERFPVILSHAPRSASGNASVAAG
LSALSQPFKLRLCRAQGEKCLRDYSSNVILIDPLANLAAVEEFLWPRIQRSESLQKSSSA
IGTFDSVAGMPGTEGTSCPSKLASAASDRRPTTRSRSLVGVGTAAGKELDDAHASLSKGK
GKAVLKCVPSESRCSQTRITTHRKVASDREPQMKQTLGNSGSEDEDLDVSPIDIDEALVI
EDDDISDDGDEQHEVYGEEPVPVCVPERVHDVKLGDAVEEDSQTSSRGKIQSHVCTGSGS
RSTNLMRNESTDLKTGNSLCTKASSFTAATMAGPASSGGRGGMGSRDYGSLSMVNCTNDP
PRLSFLSCGKQLKRSLTIYQAIQRQAVADEDDDERYTGLDNAPGEGRRLWDEIYTITYKR
ADFQFERDFTGSSSFKTSKNATTSSSSSETSWQQASLLDSIMQGELPCDLEKSNSTYNIL
LLLRVLEGLNCLAPRLRVGAVLDAFAEGKISTFDELRVVGPIVPQEEFLSSKLTSKLSRQ
IQDALALCSGSLPSWCHQLTKACPFLFPFETRRQYFHSTAFGLSRALQRLQQQQTADNPN
LVGERELRVGRLQRQKVRVSRSRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEF
YTLLSHELQRSALGMWRNSPFGSTKSRDIEKPVEITGSSTSVKKINHDCDDGNGEFIQAP
LGLFPCPWPSNADSSSGTRFSKVIDYFRLLGRVMAKALQDGRLLDLPLSPAFYKLVLGQE
LDLYDIMSFDTELGRTLQEMQALVYRKQFLESMAGDNSKEVSELRFGGAKIEDLCLDFTL
PGYPEYRLKTGESDTMVDMDNLKEYVELVVDAFVKTGIVPQMEAFRAGFNQVFPLSFLQI
FTASELDYLLCGRRELWVAETLVDHIKFDHGYTAKSPPIINLLQIMGEFTPEQQRAFCQF
VTGAPRLPPGGLAVLKPKLTIVRKHSMANGVANGNASVEAADGDLPSVMTCANYLKLPPY
SSKEVMRDRLLYAIQEGQGSFDLS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgcagccgcaagcgggcggaggcctcagcccctcctcactcttcctctcgc
cgcgcttccaaacgagctcgcctctgcgtttcttcttcaatatcaacgactacgccatct
caccctcaatctcgatctcaatcgcagtttcgaacaaattctcgtaggcaggaaggcatg
gattcatcttcggcgtctgcttctgcctcccgtcgggactcgggcggaaagaattggaat
tacggcgacagtaagcgagagagggattcaggcgacaagggcaaagaaaaggagagggag
agggaaagggagagggagagagagagggagagggagagggtaagggaggcaatggaggaa
gaggagaatgaggaggaggaggagaacggtggcgggagtaataacagcaacagcatactg
catcagaatctgacgtcagcaagcagtgcgttgcagggcttgctgaggaagttgggggcg
gggctggatgatctgttgcctggaggttcacatggaggaagcgggggaggctcaggctct
catggccgcgtgaagaggattctgtcgggactacgggctgacggggaagaggggcggcag
gtggaggctctcagccagctatgtgagatggtgtcgataggtacggaggagtcgctcagt
agcctggcggtggatgcattcgtgcctgtgctggtgggcttggtcaaccatgagaccaac
gcagacataatgttacttgccgcaagggctttgactcatctctgtgatgtactaccttcc
tcatgcgctgcggtagtgcattatggagctgttccctctttttgtgcccgcttgctcacc
atcgagtacatggatctggcagaacagtccttgcaagcgctggagaagatttctcatgaa
cacccaactgcttgtctccgcgcaggggcccttatggcagtgctgtcataccttgatttc
ttctctactggtgttcagagggtagcattgtcaacggcagccaacatgtgcaagaaacta
ccatcagatgcagccgattttgtgatggaagctgtccccttgcttacaaatcttcttcat
tatcatgattccaaggtgttagaacatgcatctgtttgcttgactcgaattgcagaatcc
tttgcatcttctcctgagaaactggatgagctttgcaatcatggcttagttgcacagact
acaaggcttgtatcagtcagtagttcaggtggtgctcaggcatcacttagcactccaact
tatacgggtctgattagacttctttcaacatgtgctagtggttcaacgttagcaacaaaa
acccttctagtccttggcatcagtagtattcttaaagatatccttgctggttctggtagt
atttccagcatttctgtttctccagctctaaacaggccccctgaacagatgtatgaaatt
gtttccttagtgaacgaacttcttccacttttgccccaaggaaccatctctctccccact
agttgtggaataaaatcaaaagtttcattgggaaagcagacttttggaagcaattctaca
aaacaagaagatataaatggaaacattccggagatatcttctcgggaaaaactattccat
gatcaaccagagcttctgcaacagtttggaatggatctatttcctgttctagtacaggtc
tatggctcgagtgtgaatgcccctgttcggcacatgtgtctctctgttatcagtaaattg
atgtattttagtacttctgacatgctgcagtctttgcttcgagtgacaaatatttcaagc
tttctagctggaattcttgcttggaaagatccacaggtcttggtacctgctttgcagatg
gcagaggttctcatgcaaaaactgcctgatacattttccaaaatgtttgttagagaaggt
gttgttcatgctgtagatacactaatactatcaaatcaacccagtacaatttcaatgcat
acagggaaggatcaagatcgtttaacaggggcaatggcaaagcatagacgtaacaagcgg
ccaagtggtggatcaaacagtgagatgaatggaattgaagagccgaaagtttcagcaact
gctggggatgcatcaattccaacctttaataccggtctccgtgcagctgttagtgctcat
gctaaacgtttcaaagataaatatttccctgctgtttcaggtcctgctgatgcaggagtt
acagagagactgtgtattttaaaaaccctatgcatgaagttaaatggcaatttgctggat
tcaaagaggaagtcaaaaggcaagggtaaagctgttgggcatatttcagcttctaatgat
gagcaatgtttgaatgttatagttgacatacttgagcaacttagcaaaggtgacggtgta
tcaacttttgaatttatcggtagtggggttgtagagtcgttactgaactatttttcatgt
actacattatctagagaaggcatgctagaggcagattttatgaagcttcatcagcaggca
ttaagaagattcacattgtttgttgaagtggctcttcctttaaataatgaaggaaaagaa
gctcctatgaaattcttagtaaacaaactacaagatgcattagcttccttagaacgtttt
cctgttatcttaagccatgctccaagatcagctagtggaaatgctagtgttgcagcagga
cttagtgcattatctcagcctttcaaactgcggctttgtagagcacaaggcgaaaagtgt
cttcgtgattattcatccaatgttattctcattgatcctttagctaatttggctgctgtt
gaagaatttctttggcctagaattcagcgaagtgagtctttgcagaaatcttcatcagca
attggcacttttgatagtgttgcaggtatgcctggcacagaaggaacatcgtgcccatct
aaattagcttcagctgcatctgatcgccgtccaacaacaaggtctaggtctttggtggga
gttggtactgctgctggcaaagaattggatgatgcccatgctagcttatcaaaaggaaag
ggaaaagctgtattgaaatgtgtaccgagtgagtcaaggtgttcacagacaagaattact
acgcatagaaaagtagcttctgatagggagccacaaatgaagcaaacactgggtaattca
ggatctgaggatgaggaccttgatgtctcccctattgacatcgatgaggcattagttata
gaagatgatgacatttctgatgatggagatgaacaacatgaggtatatggagaagagcca
gttcctgtttgtgtgccagagagagttcatgatgtgaaacttggagatgccgtggaagag
gattctcaaacatcttcaagaggaaaaattcaatcacatgtatgtactggatctgggagc
agatcaaccaatttaatgagaaatgaatctactgatctcaaaactggtaactctttatgc
acaaaagcatcatcttttacggcagctaccatggctggacctgcttcttccggtggtaga
ggtggaatggggagtagagactatggctctttatctatggttaactgtacaaatgatcct
cccagactgagcttcttgtcatgtgggaagcaacttaagaggtctttaacaatatatcaa
gcgatccaacgccaagcagtagcagatgaagatgatgatgaaagatatactggattagat
aatgcccctggtgagggtcgaaggctttgggatgagatttacactattacatataaaagg
gcagatttccaatttgagagagatttcacaggctcttcctcatttaagacttctaagaat
gctactactagcagttccagctctgagacttcgtggcaacaggcatcactcttggatagc
attatgcaaggagagcttccatgtgatctagaaaaatcaaattccacctataatattttg
ttgctactacgagttttggaaggtcttaactgtttggcacctcgtttaagggttggagca
gtattagatgcctttgcagaagggaaaatatctacatttgatgaattaagagttgtaggc
cccattgttccacaagaagaatttttaagcagcaagttaacttcaaaattatcacgtcaa
attcaagatgcactggcattatgcagtggtagtctgccttcatggtgtcaccaactgacc
aaagcctgccccttcctttttccatttgagactagaaggcagtattttcattcaactgct
tttggattgtctcgtgctctgcagcgcttacaacagcagcagactgctgataatccaaat
ctagttggtgaaagagaattgcgtgttggcaggttgcagcgccaaaaagttcgtgtctca
agaagtcgtatattggattctgcagcaaaggtaatggaaatgtattctagtcagaaggct
gttcttgaagtggaatattttggtgaggtgggtacaggtcttggtccgaccttagagttc
tacactcttttgagccatgagttacaaaggagtgcacttggcatgtggaggaattctcct
tttgggtccactaaaagcagagacattgagaagccagttgaaataactggttcatctaca
tctgttaagaaaatcaaccatgattgtgacgatggaaatggagagtttatccaagcacct
cttggtttatttccttgtccatggccatctaatgcagattcttccagtggaacccggttt
tctaaagtgatagattattttcgtttacttggacgggtaatggcaaaagctctacaggat
ggtcgactactggatttacccctctcaccagccttctataaactagtccttggacaggaa
cttgatttatatgatattatgtctttcgataccgagcttggaagaacattgcaagaaatg
caagcacttgtatacaggaagcagttcttggaatcgatggcaggtgataatagcaaagaa
gtatctgaactacgttttggtggtgctaaaattgaagacctctgccttgattttacactt
cccggatatcctgaatatcgtcttaaaacaggggagagtgatactatggtagatatggat
aatttgaaagagtatgttgagttggtggtagatgcatttgttaaaacgggcattgtgcca
caaatggaggcatttcgtgctggattcaaccaggtcttccctctttcatttttgcagata
tttactgcaagtgagctagattatcttctttgtggtcggcgtgagctatgggtggcagaa
acacttgttgatcacatcaaatttgatcatggatatacagctaagagccctcccattatc
aatcttcttcaaataatgggagagtttactcctgaacagcaacgagcattctgccagttt
gtgactggggctccgagacttcctcctggaggcctagctgtactgaaaccaaagttgaca
atagttaggaagcattcaatggcaaatggagtggcaaatggaaatgcatctgtagaagca
gctgatggagacttgccgagtgttatgacttgtgctaactaccttaaacttcctccctac
tcaagcaaggaagtgatgcgggatagattactttatgcaatacaggagggacaaggatct
tttgacctatcctga
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integrated database retrieval system