Cryptomeria japonica (Japanese cedar): 131067633
Help
Entry
131067633 CDS
T10556
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131067633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjf02000
]
131067633
04147 Exosome [BR:
cjf04147
]
131067633
04090 CD molecules [BR:
cjf04090
]
131067633
Enzymes [BR:
cjf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
131067633
Transporters [BR:
cjf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
131067633
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131067633
CD molecules [BR:
cjf04090
]
Proteins
131067633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
AAA_15
nSTAND1
Zeta_toxin
AAA
DUF87
AAA_33
APS_kinase
AAA_7
P-loop_TraG
AAA_23
Motif
Other DBs
NCBI-GeneID:
131067633
NCBI-ProteinID:
XP_057858708
LinkDB
All DBs
Position
5:155315307..155382968
Genome browser
AA seq
1273 aa
AA seq
DB search
MEAAEAPTDKTMADNNVGTLEVEKGSGKIQDKDEKFKKETDSVGSVALYQLFSFADALDY
VLMALGTVGAFAHGAAVPVFFIFFGKLIDAFGAHPNDPIAMASLVGKHALHFLYLGLVIM
AAAWLEISCWMQTGERQSARMRMRYLKSVLSQDVSYFDTNASTGEIISCISNDVVVVQDT
ISDKMGHFLHYIARFIAGFAVGFSSIWKLTLLTVAVVPLMAIAGGAYAAAMTGLSKKSQV
AYAEAGKVAEEAISQVRTVYSFVGETKAIQAYSRALGTTLKLGKKGGIAKGLGVGFTYGS
VFGAWALLLWYAGVLVRHGETSGGEAFTTIFNVIISGIALGQAAPNLGAFGKGKAAAYNI
IQMIKQKPTMSYNLLEGETLSHVEGHIELRKVCFSYPSRPDIIFQDFDLSIPAGKTVAIV
GHSGSGKSSIISLIERFYDPSAGEVLLDGHNLRSLQLKWLRDQIGLVSQEPVLFATSIIE
NILYGKDNASMEEIKEAAKAANAHSFIENLPNGYNTQVGERGTQLSGGQKQRVAIARAML
KSPKILLLDEATSALDAESEQIVQQALENIMIGRTTVVVAHRLSTIRNADTIAVLQNGKV
VESGSHQELISKGKDGAYFSLVQLQEATESGPAREEHESSRKSRQSLESLFSSQSFRSGV
NSIRFDSIGKENLDIKGSKGEQPPSFMRPSIWRLLKLNIPEWPFAILGTLGAIMAGVETP
LFALAITHVLITFYSPDKLHIKHEVEKISIIFSGAAVATVLIYLLQHYFYTLMGEQLTTR
IREMMFSAILRNEIGWFDSTENSSGMLTSCLATDTTLVRGAIADRMSTIVQNVALTVTAF
VIAFMLNWRIASVILATFPFLIGASVAEQLFMKGFCGDFNSAYSKASMVAGEAVSNIRTV
VSFSAQERVIGLFAQELIEPKKKNFLRGQIAGLGYGISQLCQFGSYGLAFWYASLLVKNH
ETDFGQVMKAFMVLVITAFGVAETLALAPDIVKGSQALEPVFRILDRRTEIEPDDLTEEE
VTEVKGDIELSHVKFRYPSRPDSIVFEDLSLHIQSGTSLALVGPSGSGKSSVVSLLMRFY
DPISGAVFIDGNDIRKLRLRSLRQQIGLVQQEPALFATTIYENIQYGKDGASEAEIIEAA
KSANAHNFISGLPDGYQTNVGERGLQLSGGQKQRVAIARAILKNPAILLLDEATSALDTA
SENVVQSALDQLMHSRTTIVVAHRLSTVQNANMIAVLHGGRVKEQGTHWQLINNPDGEYA
QLVRLQQGTKSEI
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgctgaagctcccactgacaaaacaatggctgacaacaatgtgggcaccttg
gaggtggaaaagggtagtggaaaaattcaagataaggacgagaagtttaaaaaagagact
gattcagttggaagtgtggccttgtatcagctgttttcatttgctgatgcactggactat
gtgttgatggcgttggggacggtgggggcatttgcgcacggggcagccgttcctgtcttc
ttcatattctttgggaagctcattgatgcctttggtgcacaccccaatgatcccatcgca
atggcatctctagttggaaagcatgctctccacttcttgtacttgggacttgtcatcatg
gcagcagcatggcttgagatatcatgttggatgcaaacaggggaacggcaatcagctcgc
atgagaatgcgatatttgaaatctgtgttgagccaagatgttagttattttgatacaaat
gctagcacaggagaaattatcagctgtatttccaatgatgtagtggttgtacaagataca
ataagtgacaagatgggccattttttgcattatatagctcgattcattgcaggatttgca
gtgggcttctcctcaatatggaagcttacattacttacagttgcagttgttcccttgatg
gctattgctgggggtgcatatgctgcagccatgactggtttgtcaaaaaaaagccaagta
gcatacgctgaggctggaaaagtggcagaagaggcaatatctcaagtgcgtactgtgtat
tcatttgtgggagagaccaaggctattcaagcttattcaagagctcttggaactactcta
aagttggggaagaaagggggtattgcgaaaggattgggtgtaggatttacatatggatca
gtgtttggtgcatgggcattgcttctttggtatgcgggtgtccttgtcagacatggagaa
accagtggtggtgaagcattcacaaccattttcaatgtcattatcagtggaattgctctt
ggtcaagcggctccaaacttgggtgcatttggcaaggggaaagcagctgcatataacatt
attcaaatgatcaaacagaaaccaacaatgagttataacctattggaaggcgagacttta
tcacatgttgaggggcatatcgaattacgcaaggtctgcttcagttatccatctcgacct
gatatcatctttcaagattttgacctttcaattcctgctggaaagacagtggcgattgtt
ggacatagtgggtcggggaaaagctcaattatatccttaatagagcgcttttatgatcct
tctgcaggtgaagtgctactggatgggcacaatttgaggagcctgcaactgaagtggtta
cgggatcagattggattggtcagtcaggaaccagtattatttgcaactagtataattgaa
aatattttgtatggtaaggacaatgcaagcatggaggagattaaagaagctgcaaaggct
gctaatgctcactcctttatagaaaatctacccaatggctacaatacccaggtgggtgag
agaggaacacaactttctggagggcagaagcaacgagtagctattgctagagcaatgctg
aagagtccgaaaattttacttttggatgaagcaacaagtgcattggatgcagaatcagag
cagattgttcagcaagctcttgaaaacattatgataggccggaccacagtagtggtggct
catagactatctacaattcgaaatgctgataccattgcagtgttacaaaacggcaaagtt
gtagaaagtggttcacaccaggaattgatttcaaaagggaaagatggggcatatttttct
cttgtgcagctgcaagaagcgacagaaagtggacctgcacgggaagaacatgaaagtagc
aggaaatccaggcaatcccttgaatccttattttcctcgcaaagttttagatctggagtt
aatagcattagatttgattctattggaaaagaaaatttggatatcaagggatcgaaaggt
gaacaaccaccatcatttatgaggccttcaatctggcgactgcttaaactgaacatacca
gagtggccttttgccatactaggcactctaggggcaataatggcaggtgtggagacacca
ctttttgctcttgccattacacatgttttaatcaccttctactctcctgacaagctgcat
atcaagcatgaagttgagaaaatttctattatattcagtggagcagcagttgctactgtg
ctgatatatttattgcagcactatttctataccttaatgggggagcaactcactacacgc
atccgagaaatgatgttctcagcaattttacggaacgagataggttggtttgattcaact
gaaaatagtagcggaatgttaacatcatgtttggcaaccgatacaacattagttagaggt
gctattgctgatcgcatgtcaacaattgtgcagaatgtagcacttacagtgactgcattt
gtcattgcattcatgcttaattggcgtatagcttcagttatccttgcaacatttccgttt
ctgattggtgcttctgtagctgagcaactttttatgaagggattttgtggagatttcaac
agtgcatattctaaagcaagcatggtagctggtgaagctgtgagcaatatccgcacagtt
gtatctttttctgcacaagagagagttattggtctttttgctcaagaattaattgaacca
aagaaaaagaattttttgcgaggccaaatagccgggttaggctatggcatttcccagctt
tgccagtttgggtcttatggccttgcattttggtatgcatctttgctagttaaaaaccat
gaaactgactttggacaagtgatgaaagcattcatggttttggtcatcacagcatttggt
gtggctgaaactcttgctcttgctcctgatattgtgaagggatctcaagctttggaacct
gtttttaggattcttgaccgaagaactgagatagaacctgacgatcttacggaagaggag
gtcacagaagtcaagggtgacatagaattgagtcatgtgaagtttcgctatccttctcga
ccagatagtattgttttcgaggatttaagtttgcatattcaatcaggaacaagtctagct
ctggtaggtccaagtggctcaggcaagagttcagttgtatcccttctaatgagattttat
gatccaatatcaggggcagtcttcatagatggtaatgatatcaggaaactaaggctcagg
tctttgagacagcaaattggtctagtgcaacaggagcctgctctttttgcaacaaccatc
tatgaaaacattcagtatgggaaagatggggcttctgaagctgaaataatagaagctgca
aaatcagcaaatgcacacaacttcatcagtggcctacctgacggttatcagacaaatgtt
ggtgagagagggctgcagctatctggagggcagaagcaaagagttgccattgcaagggca
atcttaaagaatccagccatacttcttttggatgaggcaaccagtgcattggatacagca
tcagagaatgtagtccagtctgctttggatcaattaatgcatagtcggacaaccattgtt
gtagcacacaggctttcgacagttcaaaatgctaacatgattgcagtgcttcatggtgga
cgggtaaaggaacaaggtacccattggcagcttatcaataatcctgatggtgaatatgct
caattagttagattacagcaaggaacaaaatctgaaatctaa
DBGET
integrated database retrieval system
