Cryptomeria japonica (Japanese cedar): 131067681
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Entry
131067681 CDS
T10556
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131067681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131067681
03036 Chromosome and associated proteins [BR:
cjf03036
]
131067681
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131067681
Coactivators
SAGA/TFTC/STAGA complex
131067681
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131067681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
131067681
NCBI-ProteinID:
XP_057858777
LinkDB
All DBs
Position
8:complement(21347668..21423724)
Genome browser
AA seq
1350 aa
AA seq
DB search
MEPGAEEISAGSNSSGMHSLQCSSQQQVNMHQQQKEEIQQQGEQQHQQLMQEWQQQLEDH
SDQQEQFERGQTQHPEQSHVQPYVQSEHQHLELPQLQQKQHWQPEQQVQMQQMLQHSQQH
HLQEMHSQQQKVQQPQHQQELVPQLQQQLQPQQQESPSQSEQQDMAMQLQQQELPLQELA
LQLQQQELALQLQQQQLPPQMPHEHLKQLPQTQQQQLEQSPAEPQQQHLQQLQQSQQHLQ
QPQQQQHSSQHFPLQTQQYVPQSQQQPQQSSLEPQHQHMQPLSEHQLQQLPLHSQQQHLP
QPQQQTQQQQLQILSQHQQQSQQLPLQSQEQHLPQSQQKPQQQVQQSPLPSQHQHLQQLP
QPQQQPQLQQAPLPSQQQHLQQLAQSQQQPQQKLQQLSLQQQQQHLQQSQQQAQQHLQQS
SMSSHQQQTQQQLPQPQQQLPQPQQQHLQQLSQPQKQHLQQLPQPQQQRSQQLPHSQQQP
QQPQPQQQRSQLQPHLQQLSQSQQQLQQKQLQPQVQQQQQQLSNQQPSQPAMGQATTSVR
GQNASGAHSISFGSLIPMILPHLSKEQSDRLQGLYTRLRRNEVTKEDFLRATRNVVGDQM
LVQAVRQMQQKHQAQSQPAPSSQASQLQQQQRQQQHVQGSSQQFMPQQSIHTQQLNEPQP
FQQVSPANLQSQTQRTSDYQPHPHSSAPASLTASHSSSDNKTQQSRQSGEQRPEISSVHG
NQTSTMNLHQVKHEVDRTMIGFPLSNQQQQQHLQGPPSSFPMYGRPPGNYSSQSFSSSPG
IPSSGVKSLAQDSQTKQVMHPQVGVQAQGGPPQLSNIKHMPKYDVSKQAKRREDDERQKI
LQSSGASHFSGQHQPSVWATSLDKEKAVNTGILPSSSVHIKQEINENSDQQHNLQTLQPM
KDNLSTIKSVPIDHGQSLILTKTESVEHQSIKTSGISSGNHPLGSTGLHSDHLMQPPLAT
PAATLHHTLSGFSGPVQMRPQVPSTPPSSMIGSQIKTPPKKMLIGQKKPFEVTGTSIQLA
SKKQKVSAGYLDQSIDQLNDVTAVSGVNLREEEEQLFAGPKEESRATEAMRKVVQEEEER
TFLQKGSLRAKLAGIVAKYGIKYISSDSERCLSLCVEERLRTMIGHLIRLSKQRVDLEKV
SHKVTITSDVRRQILAMNKKAKDDLEKKQAEEAEKLRKLNEIENVGPEGEKDETRTKAQK
AQKEEDDKMRANAANVAARAAVGGDDMLSKWQLMAEQARQKREGTSDGASNTRTNRDANR
KSVVGGLKSTNVSDHQDAPSPGIVRNLGRTSGPLSQTKPVRSICIKDVIALLEREPQMTK
STLLYRLYERGVDCSKEKGTEIQNNENTLQ
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggagctgaagaaatctctgcaggatcaaattcatctggtatgcattcactg
caatgttcttctcaacagcaagtgaatatgcaccagcagcaaaaagaagaaatccagcag
caaggggagcagcaacatcagcagctaatgcaggaatggcagcagcagctggaggatcat
tcagatcagcaggaacagtttgaacggggtcagacacaacatccagagcaaagtcacgtg
cagccttatgtgcaaagtgagcatcaacatctggaacttcctcagctgcaacaaaaacaa
cattggcagccagaacaacaggtgcagatgcagcaaatgctgcaacattcacaacagcat
catttgcaagagatgcattcacagcagcagaaggtgcaacaacctcagcatcagcaagag
ttggtaccacaattgcagcagcagttgcagccacagcagcaagagtcaccttcacaatca
gagcagcaagatatggcaatgcaattgcagcagcaagagttgccactgcaagagttggca
ttgcaattgcagcagcaagagttggcattgcaattgcagcagcaacagttaccaccacaa
atgccacacgaacatttgaaacaattgccgcagactcagcagcagcagttagaacagtca
ccagctgagccacaacaacaacatttgcaacagttgcaacaatctcaacaacatttgcag
caacctcagcaacaacaacactcctcacaacattttccactacaaacacaacaatatgtg
ccacaatctcagcagcagccacaacagtcatctctggaacctcagcaccaacatatgcag
ccattgtcagaacatcagttgcaacaattaccgttgcattcacagcaacaacatttgcca
caacctcagcagcagacacaacagcaacagttacagattttatcacaacatcagcagcag
tcacaacaactgccactgcaatctcaggagcaacatttgccacaatctcagcaaaagcct
cagcagcaggtacaacaatcaccattgccttctcagcaccaacatttacagcagttgcca
cagcctcagcagcagccacagttgcaacaggcgccactaccttctcagcagcaacatttg
cagcagctggcacaatctcagcaacagccacaacagaagttgcaacagctgtcattgcaa
caacaacagcaacatttgcaacaatctcagcaacaggcacaacagcatttgcaacaatca
tcaatgtcttctcatcagcaacaaactcagcaacagttgcctcaacctcagcagcagttg
ccacaacctcagcagcaacatttgcagcaattatcgcaacctcaaaagcaacatttgcag
cagttgccacaacctcagcagcaacgttcacaacagctaccacattctcaacaacagcca
caacagccacaacctcagcaacaacgttcgcagctgcagccacatctgcagcagctatca
caatctcaacaacagttgcaacagaaacaactccagcctcaggtgcagcagcagcagcag
cagctaagtaatcagcaaccatcacagcctgctatgggccaagcaactacttctgtcagg
ggacaaaatgcatctggcgctcattctatttcttttggctctttgataccaatgattttg
cctcacctatcaaaagaacagtcagatcgacttcagggactatatacgagattgagaagg
aatgaggtaaccaaggaggattttctaagggccaccaggaatgttgttggagatcaaatg
cttgtgcaagcagtccgccaaatgcagcaaaagcatcaagctcaatcccagccagcacca
agttcacaagcaagccaactgcaacagcagcagcgacaacagcaacatgtgcaaggctct
tctcaacagttcatgccacaacaaagcattcatacacagcaattaaatgaaccacagcca
tttcagcaagtttcaccagctaatctacaatcacaaactcaaagaacttctgattatcaa
ccacatcctcacagttctgcaccagcatccctgacagcatcccactcatcttcagataat
aagacccaacagtcgaggcaatcaggtgagcagcgcccagagatttctagtgtacatggg
aatcaaacttcgacaatgaatctgcatcaggtcaagcatgaggtagacagaactatgatt
gggttcccactttcaaatcagcaacaacaacagcatctgcagggtcctccatcatctttt
cctatgtatgggcgtccgcctggaaattattcatctcagtctttttcttcatcaccaggc
ataccgtcaagtggggttaagtcactagctcaagattcacaaacaaagcaagtgatgcat
cctcaagttggggtccaagcccaaggaggcccaccccagttgtcaaacataaagcatatg
cccaagtatgatgtatctaaacaagctaagagacgtgaagatgatgaaagacagaagatt
ctgcagagcagtggcgcttctcacttctctggtcaacatcaaccaagcgtctgggcaaca
tcattagacaaagagaaagcagtaaacacagggatattaccatcatcttcagttcacata
aaacaagaaattaatgaaaattccgatcagcagcataatcttcaaactcttcagccaatg
aaagataacttatcaacaattaaaagtgttcctattgatcatgggcagtccttgatactg
acaaaaactgaaagtgtcgagcatcagagcatcaaaaccagtggcatttcctcagggaat
catcctttgggttccactggtttacattctgatcatttaatgcagccaccattagcaact
ccagctgcaacattacatcacacattgtctggatttagcggacctgttcaaatgcgacct
caggtgccttcaacaccaccttcctcaatgattggttctcagatcaagacaccacccaag
aaaatgttgattggacagaaaaagccttttgaggttactggcacttccatacaacttgca
agtaaaaaacaaaaagtttctgcaggttatctagatcaaagcattgaccaacttaatgat
gttactgctgtcagtggagtgaacttaagggaagaggaagagcagttgtttgctggacct
aaagaagaaagccgtgcaacagaagcaatgcgaaaggttgtgcaagaagaggaggagaga
acttttttacaaaaaggatcactccgtgcaaaattagctggaatcgtggcaaagtatggt
atcaaatatattagcagtgacagtgagcgttgcttgtcactgtgtgttgaggaacgttta
cgaacaatgataggtcacctgatcagactgtctaaacagagagttgatcttgagaaggtc
agccataaagttactataacatctgatgtacgacgccaaattctagcaatgaataaaaaa
gctaaggatgatttggagaagaaacaggcagaagaggcagaaaaacttcggaaactaaat
gagatagagaatgtgggccccgagggggaaaaggatgaaacccgtacaaaagcacagaag
gcacagaaagaggaagatgacaaaatgagggcaaatgcagcaaatgttgctgcacgagct
gctgttggaggagatgacatgttatcaaagtggcaattgatggctgagcaagctcgacag
aagcgtgaaggtacatcagatggagcatctaacacccgaactaacagagatgcaaatagg
aaaagtgtggttggtggattaaagtccacaaatgtatctgatcatcaagatgcgccctca
cctggaatagttcgaaatctggggagaacttcagggccattgtctcagaccaagcctgtg
cgctcaatatgtatcaaagatgtaattgctttgctagagcgggagccacaaatgactaaa
tcaacattactttatcgtttgtatgagagaggtgtagattgcagtaaggagaaagggact
gaaattcagaataatgagaacacactgcagtga
DBGET
integrated database retrieval system
