Cryptomeria japonica (Japanese cedar): 131067875
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Entry
131067875 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131067875
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131067875
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131067875
MMR (mismatch excision repair)
131067875
DSBR (double strand breaks repair)
HR (homologous recombination)
131067875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131067875
NCBI-ProteinID:
XP_059078107
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Position
6:514546110..514555018
Genome browser
AA seq
391 aa
AA seq
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MCTNADCFIGLVSEVVGVNGFTMPGLLLWLFYLSVCGCDYFQSASSLFTLTGSHYIISKG
SVKEANARYNNLNSHLEITLSDTSILKRCTNEEQPDQQSPPFTPISELFHLTNNTMVDII
GLVLYVGDIIPIHRKDGSQTQKCVVKINDLSSSTIDINLWGPMVEQKGLEVKNMLTNDSV
VILALRNARVGYFNGKLINITAATTLHINPSFPEAELLKLKGKDPLLVVPFIAETIHIDG
KYTRMTISSICERMSVKLETIQTTLLVILHFVNVNDQNFYYTACPLIVNGRPRKKKCTLW
ATAFDEGGIHLLHKTAKQLYALQNDATTTETPSSVIKRLLSRYYSFTVLLSTKTYNSESK
MKMTVNKVAPVDFKVECHALLAETSYLSTES
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaatgcggactgttttattgggcttgtttctgaggttgtcggcgttaatggt
tttacaatgccaggattgttactttggttattttatttaagtgtttgtggatgtgattac
tttcagtctgcatcgtctctgtttactttgacaggttcacattatattatttcaaaagga
tctgttaaggaggcaaatgcaaggtacaacaacctaaacagccatttagaaatcaccttg
tctgatacatccatactaaaacgttgcaccaatgaagaacaaccagatcaacaaagtcct
cctttcacgcccattagtgaattgtttcatctaacaaataacacgatggttgacataatt
ggtcttgttctatatgttggagatatcattcctatacataggaaagatggcagtcaaaca
caaaaatgtgtggtgaaaattaatgatctatctagttcaacaattgacatcaacttatgg
ggtccaatggtagaacaaaagggcctagaagtgaaaaatatgttgaccaatgatagtgtg
gttatccttgctttgcgtaatgctcgtgttggctatttcaatgggaagcttataaacata
acagctgcaacaacattacatattaacccaagttttccagaagcagagcttctaaaatta
aaaggaaaggaccctttgcttgttgtaccctttattgcagaaactatccacatagatgga
aaatatactagaatgacaatttcttcaatctgtgagcggatgagcgtcaaactagaaaca
attcagacaacattgctagttattctgcactttgtgaacgtcaatgatcaaaatttctat
tacacagcttgcccactaatagtcaatggaaggcctcgcaagaaaaaatgtactctatgg
gccactgcatttgatgagggtggcattcacttgctacacaaaactgcaaaacagctctat
gcactacaaaatgatgcaacaacaacagagacaccttcctcagtgatcaagagactacta
tcacgttactattcattcacagtgttgctttctactaagacatataattcagaatcaaag
atgaaaatgacagtcaataaagttgctcctgttgacttcaaagttgaatgccatgcacta
cttgcagaaactagctacctaagtacagagagttag
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