Cryptomeria japonica (Japanese cedar): 131067877
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Entry
131067877 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131067877
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131067877
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131067877
MMR (mismatch excision repair)
131067877
DSBR (double strand breaks repair)
HR (homologous recombination)
131067877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131067877
NCBI-ProteinID:
XP_059078108
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Position
6:514695447..514699240
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AA seq
537 aa
AA seq
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METSLKATEDINTVIESMLQERNKLKSNLAKIIAHYQHKSPKQTTVNLSTSSAAITTIHS
IEVAPSPIPSTEQLADPTFATELPSPQTTTSENINPIKTLNPYQNKWTIKGRVTHKQPIK
AYSTATKNGHVFSFDIVDCDDSEIRITCFDEIAKLHSNHVDIGSHYIISKGSVKEANARY
NKINSHLEITLSDTSILKCCTNEEQPDQQSPPFTPISELFHLTNNTLVDIIGLVLYVGDI
IPIHRKDGSQTQKCVVKINDLSSSTIDINLWGPMVEQKGLEVKNMLTNDSVVILALRNAR
VGYFNGKLINITAATTLHINPSFPETELLKLKGKDPLLVVPFVAEPIHIDGKYTRMIISS
ICEWMSVKPETIQTTLLAILHFVKVNDQNFYYAACPLIVNGRPCKKKCTQHADDSWFCSR
SQMTMQDYNYSYLLPLKLQDATGTLWATAFDEGGIHLLHKTAKQLYALQNDATTIETPSS
VIKRLLSRYYSFTVLVSTKTYNSESKMKMIVNKVAQVDFKVECHALLAETGCLSTES
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagtttgaaagcaacagaggacatcaacactgtaattgaaagcatgttgcaa
gaaagaaacaagttaaagagtaacctcgcaaagatcattgcccactaccaacataaatcg
ccaaagcaaacaacagtcaatctctctacatcttctgctgctataacaaccatacatagt
attgaagtagcaccttcgccaataccaagtactgaacaattagctgatccaacgtttgca
actgaattgccatccccacaaacaacaacttctgaaaatataaaccctatcaaaactttg
aatccataccaaaataaatggactatcaaagggagagttactcataaacagcctattaag
gcatatagcacagcaaccaaaaatggccatgtgtttagctttgatattgttgattgtgac
gattctgaaattagaattacatgttttgatgagatagctaagttacactctaaccatgtg
gacataggttcacattatattatttcaaaaggatctgttaaggaggcaaatgcaaggtac
aacaaaataaacagccatttagaaatcaccttgtctgatacatccatactaaaatgttgc
accaatgaagaacaaccagatcaacaaagtcctcctttcacgcccattagtgaattgttt
catctaacaaataacacgctggttgacataattggtcttgttctatatgttggagatatc
attcctatacacaggaaagatggcagtcaaacacaaaaatgtgtggtgaaaattaatgat
ctatctagttcaacaattgacatcaacttatggggtccaatggtagaacaaaagggccta
gaagtgaaaaatatgttgaccaatgatagtgtggttatccttgctttgcgtaatgctcgt
gttggctatttcaatgggaagcttataaacataacagctgcaacaacattacatattaac
ccaagttttccagaaacagagcttctaaaattaaaaggaaaggaccctttgcttgttgta
ccctttgttgcagaacctatccacatagatggaaaatatactagaatgataatttcttca
atctgtgagtggatgagcgtcaaaccagaaacaattcagacaacattgctagctattctg
cactttgtgaaggtcaatgatcaaaatttctattacgcagcttgcccactaatagtcaat
ggaaggccttgcaagaaaaaatgtacacagcacgctgatgattcttggttctgctctaga
tctcaaatgactatgcaagactataattatagttacctcttgcctctaaagttgcaagat
gccacaggtactctatgggccactgcatttgatgagggtggcattcacttgctacacaaa
actgcaaaacagctctatgcactacaaaacgatgcaacaacaatagagacaccttcctca
gtgatcaagagactactatcacgttactattcattcacagtgttggtttctactaagaca
tataattcagaatcaaagatgaaaatgatagtcaataaagttgctcaagttgacttcaaa
gttgaatgccatgcactacttgcagaaactggctgcctaagtacagagagttag
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