Cryptomeria japonica (Japanese cedar): 131068208
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Entry
131068208 CDS
T10556
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131068208
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
Other 90S particles
131068208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_like
Ge1_WD40
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
131068208
NCBI-ProteinID:
XP_057859373
LinkDB
All DBs
Position
1:17441141..17485991
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AA seq
541 aa
AA seq
DB search
MFKMKKQQRQKNNISRGGGRGGGRGRGGGGGGRGRGGGGGSNGKRKTPAIDNDPFFNDKN
PKRQRGKGEEILSSEEDDDDFVDRNGEEEDVALEDTETADDKRLKLAKAYLDKIREITKA
QEEENEEDEDEEGRRGKRDSLVAEILQQEQLEESGRVQRLFASRVVKPSKQVEWRVVKRH
KQSVTTVVLREDDSKGFSASKDGTIFHWDVETGASEKYDWPNREAFTKNSNKKQGSKHIL
SMAISSDGRYLATGGLDRYVHLWDTRTREHIQAFPGHRGAVSCLAFRQGTQQLISGSFDR
TIKLWSAEDRSYMDTLYGHQSEILTVDCLRKERVLSVGRDHTLRLWKIPEETQLVFRGHA
ASLECCCFVNNEEFISGSDDGSIELWSMMRKKPVFIAKGAHGNTGIQHLSEDHGTGEKPE
EMTSSQINDGNDIGNGNITHKMGSSSFVESWVGALAVCTGSDLAASGAGDGMVRLWAIEN
SSKSLKVVHDIPLTGFVNSLAFARSGRFLIAGVGQEPRLGRWGRIQAARNGVALYPIELS
C
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagatgaagaagcagcagcgtcagaaaaacaacatttccagaggaggaggaaga
ggaggaggaagaggaagaggaggaggaggaggaggaagaggaagaggaggaggaggagga
agtaacggaaagagaaaaactcctgcaattgacaatgatccgtttttcaatgataaaaac
cccaaacgacagagaggaaagggcgaggagattctcagcagcgaagaagacgacgacgat
ttcgttgacagaaatggggaagaagaagacgtcgccttggaagacacagagactgccgat
gataagcgacttaagttggccaaagcttatctggacaaaattagggaaataacaaaagcc
caggaggaagaaaacgaagaagatgaagatgaagaagggcggaggggtaaaagggattcg
cttgttgccgagattctccagcaagagcagctcgaagagagcggccgggtgcagcgcctt
tttgcttcgagggttgtgaagccctccaagcaggtagaatggcgagttgttaaaagacac
aagcagtctgtaacaactgtagttctaagagaagatgattcaaagggtttctcagcatca
aaagatggtactatttttcattgggatgttgaaacaggtgcaagtgagaaatatgactgg
cccaacagggaagcctttacaaaaaactcaaataagaaacagggtagcaaacatattcta
tcaatggctatcagttctgatggccggtatttggctactggaggattagatcgttatgtt
catctatgggatacccggacacgagaacatattcaggcctttccaggtcatagaggagct
gtgtcttgtttagcttttcggcaaggtacacaacaacttatatccggatcatttgatcgc
acaatcaaattatggagtgcagaggacagatcctacatggatactctctacggtcatcaa
agtgaaatcctaacagtagattgcttgcgaaaagaacgagttctttctgttggacgtgat
cacacattgcgtttatggaagattcctgaggagacacagttagtgtttagaggacatgca
gcttctttagaatgttgttgttttgtcaacaatgaagagttcatatcaggttctgatgat
ggaagcatagaactttggagcatgatgcggaaaaaaccagtttttattgcaaaaggtgca
catgggaacacaggcattcaacatctctctgaggatcatggcactggggaaaagccagaa
gaaatgacatcctcacaaattaatgatggcaatgatattgggaatggtaacataacacat
aaaatgggaagtagctcttttgtagagtcctgggttggagctcttgcagtgtgtacaggg
agtgatcttgctgcatcaggagctggtgatggaatggtgcgattgtgggctatcgagaac
agcagtaaaagccttaaagttgtgcatgacattcccttgactggatttgttaattcactc
gcatttgcacggtctggacgatttcttattgctggagttgggcaggagcctcgattaggt
agatggggtcgcattcaagctgctcgtaatggtgttgctttgtatccaattgagctttca
tgctga
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