Cryptomeria japonica (Japanese cedar): 131068390
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Entry
131068390 CDS
T10556
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131068390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131068390
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
131068390
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
131068390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
HHH_2
Motif
Other DBs
NCBI-GeneID:
131068390
NCBI-ProteinID:
XP_057859554
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All DBs
Position
5:complement(124734254..124801388)
Genome browser
AA seq
442 aa
AA seq
DB search
MHRALFHKISQMKRTRNMCIDNKVVETTMAVISTPTRTTIFNPTTKKRSVKPINAHKTKR
ILIREFEKDYTTSCSASSSLHKTPTESDNLTESKTTETYNSYISATDNKTDLCWRSLNVG
TKELFLDLTFPTGQTFRWRETGPTCGPSEYTGVIGVHLFTLRQVGDEVKYFIHGRGGQSE
EEQRAVLNDYLNLGISLKDMWNKFVQVDSRFAALAPYMGGARLLRQDPLECLFQFICSSN
NNIKRITQMVEYLSSFGPYLGTVDGTYFHAFPSLKELSSVTEGQLRAAGFGYRAKYIVET
VKALNSKNTGGNEWLLSLRNLPLEESMEALCTLPGVGPKVASCIALFSLDQHHAIPVDTH
VWQIAMQYITPELSGEHLTPKLSQKVSEAFVTKFGKYAGWAQTVLFISELSSQQAILPQH
LRTVKEPKVKTKHKKGSVKDRD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgagccttgtttcacaagatttcacaaatgaagagaacgaggaatatgtgcata
gataacaaggtagttgaaaccacaatggcagtaatctcgactcctacaagaacaactatt
tttaaccctaccaccaaaaaaaggtctgtcaaacccattaatgcccacaaaactaagagg
atcctcatccgtgaatttgaaaaagattatactaccagttgcagtgcatcatcatcatta
cacaaaacaccaactgagagcgataacttaactgaatccaaaacaacagaaacctataac
agttatatatctgcaacagataataaaactgatttatgttggagaagcctcaatgtgggc
acaaaggaactatttttggatctaacatttcccacaggacagacattcagatggagggaa
actggccctacgtgtggcccatcagaatacacaggggtgattggggttcacttgttcaca
ctcagacaggttggagatgaggttaagtatttcattcacggtcgaggagggcaatcagaa
gaagaacaaagagcagtgcttaatgattatctgaatctgggtatttcattgaaggacatg
tggaataaatttgtacaagtggattcaaggtttgcagcattggctccttatatgggtggt
gctcgtttgctccgacaggaccctctggaatgtctgttccagttcatttgctcttcaaat
aacaatattaagaggataacgcagatggtggaatatctttccagttttggaccttatttg
ggcaccgttgatggcacttattttcatgcatttccttctttgaaagaattatcatcagtt
acagaaggccaacttcgggcagctggatttggttacagggctaagtatatagttgaaaca
gtgaaagctctcaactccaaaaatactggaggcaatgagtggctcctgtctctgcggaat
ttacctcttgaagagtctatggaggctctctgtaccttgccaggagtaggcccaaaagta
gcatcttgtattgctcttttttctctagatcagcatcatgccattcctgttgatacacac
gtgtggcagattgccatgcaatatatcactcctgaactatcaggtgaacacttgactcca
aagctgtcccagaaggtctctgaagcatttgtgacaaagtttggtaagtatgcagggtgg
gctcaaactgtacttttcatttcggagctatcttctcagcaagctatcctacctcaacat
ctgcgtactgtcaaggagccaaaagtaaagaccaaacacaaaaaaggttcagtcaaagac
agagattag
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