Cryptomeria japonica (Japanese cedar): 131068529
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Entry
131068529 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131068529
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131068529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131068529
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131068529
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
Utp12
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
CFAP251_N
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
EIF3I
PQQ_2
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Cytochrom_D1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
131068529
NCBI-ProteinID:
XP_057859706
LinkDB
All DBs
Position
3:288446701..288483688
Genome browser
AA seq
675 aa
AA seq
DB search
MPLQNLKDVFTAFSPSADFLAITTGDGRIKIWDTVNGQMQSEFSDIAASNLGTSNGHLSV
DYSCMKWSPNMGKKKKKGKKSLLVLGTGVGDVLALDPMLGEVKWRCSDCHPGGTMAISFA
SNGRVVYTTGVDGMVCELDSETGNLLEKFRASKKAISCLAVSSDGRSLATAGAELKHFSL
PDKKKLQKFTGHPNSVRVMMFATSGKHIISSAAGERHVAVWKCDGSKESRAAACVLSMEQ
PAVALDCKAFGDDGEGLSVLAVSESGVAYIWHSESVEELTSAKPSKVTVSLGKEDSSISK
SLRKSKPCVFAAKLQGIGSDSSLAVLVAYGNLVKPSFERLEVMKKGKDIILSASESGMLL
AAPHDKSPATIEGQQNGVTALGPANAEDAIFPIPRVEIADDEKHKTKYGKKRRASDIEAI
PNEVGDDLMKIDRPADGNTEVVEDDNEPTMEEKLMQLGIIEKEKEDDPSQPSHALTPIPP
NADSVVVLLRQALRSNDMILLAQCLDVRDPMVRRNSVYSLSSADALKLFKSMVHRLKSGP
RRAPYLLPWIKLVLLRHASSIMSDESSISFLNTLYQMIESRVSVFWPLLQLSGRLDLINE
QISPDMGDEAPEVEPALVYVDESEEEDEEELVDEAADMSADESDDGSLEDVVTLDQVVDN
GMMNAGSGRDSDEDL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcaaaacttgaaagatgtcttcactgcatttagtccttcagcagattttctc
gccattactacaggcgatgggcgcatcaagatatgggacacagtaaatggtcagatgcag
agtgagttttctgacattgcagcttcaaatcttggcacatctaatggccacctgtctgtt
gattattcctgcatgaaatggagtccaaacatgggaaaaaagaaaaagaaagggaaaaaa
tcattactggttttaggtactggcgtgggtgatgttttagctctagaccctatgttgggc
gaggtcaaatggagatgcagtgactgtcatcctgggggcacaatggccatctcctttgca
agtaatggacgtgttgtatatactactggggttgatggcatggtatgcgagttggattca
gaaacagggaatctcttagaaaaattcagagcttcaaaaaaggcaatttcttgtttggca
gtctcttctgatggaagaagcttggctacagcaggtgcagaattgaaacattttagtttg
ccagataaaaagaagttgcagaaatttacagggcatccaaattctgtgagggttatgatg
tttgcaacaagtgggaagcatataatttcttctgcagctggtgagaggcatgttgctgta
tggaaatgtgatggtagtaaggaatccagggctgctgcttgtgttctttcaatggagcag
ccggctgttgccttggactgcaaagcttttggagacgatggtgaaggtctaagtgttctt
gctgtttcagagtcaggtgttgcttacatctggcacagtgagagtgtagaagagttgacc
tcagcaaaaccaagtaaagttacagtgtctttaggcaaagaggacagctctatttcaaag
tctttgagaaagagtaagccttgtgtttttgcagcaaaactacaaggtattggaagtgat
agctctttagcagttctagttgcatatggtaacttagtaaagccaagttttgagaggttg
gaggtcatgaagaaaggcaaggacattattttgagtgcttctgagagtggaatgttattg
gctgccccacatgataagagtcctgcaacgattgaaggtcaacaaaatggagtcaccgca
ttaggtcctgccaatgcagaagatgccatcttcccaataccaagagttgagattgcagat
gatgaaaagcacaagacaaaatatggaaaaaagcgaagggcaagtgatattgaggcaata
ccaaatgaagttggcgatgatctgatgaaaatagacagaccagcagatggcaatacagaa
gttgtggaggatgataatgaaccaacaatggaagaaaaactcatgcaactagggattata
gagaaggagaaagaagatgatccaagccagccaagtcatgctttgaccccaataccacct
aatgcagattctgttgttgttcttttgagacaggcattgagaagtaatgatatgatatta
ttggcacaatgcttggatgtgcgagatcctatggttagaaggaactcagtttattctctt
agttctgccgatgctctaaagcttttcaaaagtatggttcacaggttaaaatctgggcca
aggagggcaccgtatcttctgccttggataaaattagtacttctacgacatgccagctct
ataatgtctgacgagtcttctataagttttctcaataccctttaccagatgatagaatca
cgggtctctgtattttggccactgcttcagctgtctggtcgtttagatttaattaatgaa
cagatatcaccggatatgggggatgaagctcctgaagttgagccagctttagtgtatgtg
gatgaaagtgaagaagaagatgaagaagagctagtggatgaagcagcagacatgagtgca
gatgaaagtgatgatggcagcctggaagacgtagtaacacttgatcaagtcgttgacaat
ggaatgatgaatgcaggaagtggaagagattctgacgaggatttgtaa
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