Cryptomeria japonica (Japanese cedar): 131068860
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Entry
131068860 CDS
T10556
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131068860
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131068860
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
131068860
NCBI-ProteinID:
XP_057860122
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Position
3:complement(760387837..760389103)
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AA seq
236 aa
AA seq
DB search
MGNPIEGCWHCDPYWVNNRNILADCGIGFDKNAIRVTRQDKISLSSYADGLIDTIMGSTA
ITISNNFFTHHDKVMLLGHCDVYTQDIKMQVTVAFNLFGEGLVQRMPRCRHGYFHVVNND
YTHGEMYSIGGSANPTIHSQGNRFLAPDNRFQKEVTKPKDLIESNWRSMGDLMLNGAFFI
ALGAGASSNYAKASRMAKRPSSIVGSITTNSGVLTCTQSLITKGEYISNLILKFEA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccccattgaaggttgttggcattgtgatccctactgggttaataacagaaac
atactagctgactgtggtatcggattcgacaaaaatgccatcagagttacaagacaagac
aagatatcgttgtcaagctacgcagatggactgatcgacaccataatgggatccactgct
ataaccatttcaaacaactttttcactcaccatgacaaggtgatgcttcttggacactgc
gatgtctatacccaagacatcaaaatgcaagtaacagttgctttcaacctctttggagaa
gggcttgttcaacgaatgcccagatgccgacatggatactttcatgtggtgaacaatgat
tacacccacggggaaatgtattcaattgggggaagtgcaaaccccaccattcatagccaa
ggcaatagattccttgctcctgataatcgattccagaaggaggtgacaaagcccaaagat
ttaatagaaagtaattggagatcaatgggagatctgatgttaaatggggcattcttcata
gcattaggggctggagcatcctcaaactatgccaaagcatcgagaatggcaaaaagacct
tcctctatagtgggctctataactacaaattcaggtgttctcacctgcactcagtcacta
attactaaaggggaatatattagtaatcttattctcaaatttgaagcgtag
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