Cryptomeria japonica (Japanese cedar): 131068884
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Entry
131068884 CDS
T10556
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131068884
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131068884
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131068884
NCBI-ProteinID:
XP_057860140
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Position
3:complement(761065143..761068461)
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AA seq
430 aa
AA seq
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MAGTGNAIAFFLLIAMFCIHAEATKSFGIFESLAPATVRQPAVTEPAPKPHVEDPQTVVE
MVERNLNSSRRELGYLSCGTGNPIDDCWRCDPNWESNRQRLADCAIGFGRNAIGGQGGRY
YLITDPNDDDPVNPRPGTLRHAVIQTEPLWIIFQRDMVIQLKEELIMNSHKTIDGRGANV
HIANGPCITIQYVTNIIIHGIHIHDCKPAGNALVRDSPGHYGYRTISDGDGVSIFGGSHI
WVDHCSLSSCADGLIDAIRGSTAITISNNYMTHHDKVMLLGHSDEYTQDTNMQVTIAFNH
FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFIAPADRFAKEVTK
HEDAGQSEWQNWNWRSEGDLMLNGAFFTASGTEASSSYAKASSLGAKPSSLMDSLTGAAG
VLSCQKGSRC
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggctgggacaggaaatgctatagcattctttcttttaatagcaatgttttgcattcat
gccgaagccaccaaatcctttggaatcttcgaaagcctggctccagctacggttcgacag
cctgcagtgacagaacctgcaccgaaacctcacgtggaagatcctcaaactgtagttgaa
atggtcgaaaggaaccttaacagttcgaggagggagctgggttatctgtcatgcggaaca
ggaaatccgatcgacgattgctggaggtgtgaccccaactgggaaagcaacaggcagaga
ttggctgactgtgccatcggatttggcagaaacgccattggaggacaaggcggcagatat
tatttgataacagatcccaacgatgacgatccagtgaaccccaggcccggcactctgcgt
catgctgtgattcagacagagcccctgtggatcatattccaaagagacatggtcatccaa
ctcaaggaagagctcatcatgaacagtcacaagacaattgatggcagaggggcaaatgtc
cacattgcaaatggcccttgcattacaatacagtatgtgaccaatataatcattcatggc
attcatatccatgactgtaaacctgcaggaaatgctctggtgagggattctcctggtcat
tatggatacagaactatcagtgatggcgatggggtgtctatatttggagggagtcatatt
tgggtcgaccattgctctctttccagctgtgccgacggacttattgatgccatcagaggg
tccactgctatcactatctccaacaattatatgactcaccatgataaggtgatgctcctg
ggccacagtgacgagtatacccaagatacaaatatgcaagtaacaatagcattcaatcat
tttggagaagggcttgttcaacgtatgcctagatgccgacatgggtattttcatgtagtg
aacaatgattacacccactgggaaatgtacgccattgggggaagcgcaaatcccaccatc
aacagtcaaggcaatagattcattgcccctgccgacagattcgctaaagaggtgaccaag
cacgaagatgctggtcagagtgaatggcagaactggaattggagatcagaaggtgatctc
atgttaaatggagcatttttcactgcatcaggaacggaagcatcatcaagctatgcaaaa
gcttctagtttgggggcaaagccgtcgtctctgatggattctctcaccggagccgcaggt
gttctctcctgccaaaaaggctcccgttgctga
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