Cryptomeria japonica (Japanese cedar): 131068944
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Entry
131068944 CDS
T10556
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131068944
Spliceosome [BR:
cjf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131068944
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
131068944
NCBI-ProteinID:
XP_057860212
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All DBs
Position
7:complement(792924783..792941577)
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AA seq
518 aa
AA seq
DB search
MGSTAGQPQFRNTQPPVKVLHLRNLPWECTEEELIELGRPFGKIVNTMLNVGPNRNQGFM
EFEDLNQAISMVSYYASSSEPAQVRGKTVYLQYSNRHEIVNSKRAGDEPSNVLLVTIEGV
EAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTAASARSALDGRSIPRYL
LAEHVGPCHLRMSFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQFGIGPDGQRRE
PESNVLLAAFENMLYAVNVDILHMVFSAFGTVQKIAIFEKNAGTQALIQYADVPTAVIAK
EALEGHCIYDGGYCKLHLSYSRHRDLNVKGNNDRSRDYTLPQVGILQNQPPVFGQQPSVL
PAGIVGQVSSAMPVYSGNQLVSGVHPPPQPGVLGPRPVQNWEFEQLHPASQVASSPMPGS
IPNQIYNSSPVTPQPPLDATPRQTSLPVPPYSTFFPGPPPLKNASPHENHANFGMPLQGG
QAPNVAAAFSMPSHSNQATYVNTFVGGVSGGGSSAYHT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgactgcagggcagccgcagttccggaacactcagccaccagtcaaggttctg
caccttagaaatttgccgtgggaatgcacggaggaggagcttattgaattggggaggcca
tttgggaaaattgtcaacacgatgctcaatgttggaccgaatcgcaatcaggggtttatg
gaatttgaggacctcaatcaagctatttcaatggtttcatattatgcttcatcatcagaa
cctgctcaggtgcgaggcaaaactgtatacctgcaatactcaaacagacatgaaattgtc
aacagtaaaagagctggggatgaaccaagcaatgtactgctggtgacaattgaaggggta
gaagctggtgatgtcagcattgatgttttacatttggtgttttcagctttcggttttgtg
cataaaattgcaaccttcgaaaaaagtgctggttttcaggcactggtccaatttagtgat
gcaaacacagctgcttcagcaaggtctgctctagatggtagaagcattccgaggtatttg
ctagcagagcatgtgggcccttgtcacttgcgcatgtcattttctgcacatactgatttg
aatgtcaaattccagagtcaccgaagcagggactacacaaatccaaatttacctgttgcc
ccttctgctatagatggaactgggcagtttggcataggtcctgacggacaaagaagagag
ccagaaagtaatgtgcttcttgcagcctttgagaacatgctatatgcagtgaatgttgat
attctgcacatggttttttctgcatttggcacagttcagaagattgcaatatttgagaag
aatgcaggaactcaagctttgatacagtatgcagatgtgccgactgcagtgattgcaaaa
gaagcattagaaggacattgcatctatgatggaggctactgcaagctccatctttcttat
tctcgccacagagacctcaatgtgaagggtaataacgaccgtagcagagactacacactt
ccacaagttggtattttacaaaaccaacctccagttttcggtcagcaaccttcagttctt
cctgctggtattgttggacaggtatcatctgcaatgcctgtatattcaggaaatcagctt
gtgtcaggtgtgcatccaccaccacaaccgggtgtcttgggtcctcgaccagttcaaaat
tgggagtttgaacagttgcatcctgcatcgcaagtggcaagttcacccatgcctggatct
ataccaaatcaaatatataattcctctcctgtaacaccccaacctcctttagatgcaact
ccgcgacagacttccttgcctgtgccaccatactctacattttttcccggccctccccct
ttaaagaatgcatcacctcatgaaaaccatgcgaattttggcatgccactgcagggcggg
caggctcctaatgttgctgctgcattctctatgccctcacacagcaatcaggctacatat
gtaaacacgtttgtgggtggagtatcaggaggtggatcatctgcatatcatacatga
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integrated database retrieval system
