Cryptomeria japonica (Japanese cedar): 131069017
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Entry
131069017 CDS
T10556
Name
(RefSeq) protein transport protein SEC24 C
KO
K14007
protein transport protein SEC24
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131069017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131069017
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131069017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
131069017
NCBI-ProteinID:
XP_057860283
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All DBs
Position
4:524079902..524189182
Genome browser
AA seq
1138 aa
AA seq
DB search
MGSPVPPGERPGYPNSTGYPSQRAFTPVPSDSAGALAGGMQNLNINRPPPPPWATQQAPR
PGAAPQGMQNSGPPFVPAGSRPMGMGVPFTSTNPPHAPQSSASPLGVMPSGSLAARPTGR
PAVRPAGPNYGGAPPVSAPNSNMGRPVTTPFVQRPNAPPSRPPGAMPVQDGLGSPFAPGL
NVNSSNQGINGTSPFVQGAPPMRPPFSQGANAMHSPAGFPRSSGPTAASGAGTVPNAQRP
LASAVPPPQIPSASHTPSPAPPNTFPAPGLAPSSVPPPPFAVASQRGPPSSSSLYAAQPW
RPPSQQHNYPDSYVPPPPPVAGNQTPGMFGMPAPPRHLSQTIPPMPPTMGHPPGSGVLGM
GQPGSPAGGQASGPSRIDPNQIPRPVPNSTSIIFETRSNNQSNLPPSATSDFIAKDTGNC
SPRYMRCTVNQIPCSGDLLSTSGMPLALMVQPFALPHPSEEAVQVVDFGENGPVRCSRCK
GYINPFMRFVDQGRRFICNLCGFSNETPREYHCNLGPDGRRRDADERPELCRGTVEFVAT
KEYMVRDPMPAVFFLLIDVSMNAINTGATAAACSGINRAIADLPEGPQTKVGIATFDSTI
HFYNLNRAFQQPSMLVVPDVQDVYTPLQTELIVPISECREHVEQLLESIPTMFQHNKIPE
SAFGAAIKGAFLAMKSTGGKLLVFQSVLPSVGIGALSAREAEGRANTIAGEKEVHKLLQP
ADKTLKTMAIEFAEFQVCVDLFLTSQSYVDIASITVVPRTTGGQVYYYYPFSAVADSAKL
YNDLRWNITRPQGFEAVMRVRCSQGLQVQDYFGNFCKRIPTDVDLAGIDCDKTIMVTFKH
DDKFQEGSECCFQCAVLYTTVYGERRIRVTTLSLPCTSVLSNLFRGADLDAQFTYFLKQA
GNEIPTTPLKQVRDQMTELCISILHTYRKFCATASSSGQLILPEALKLLPLYTLALTKGT
GLRSDVRIDDRSYWLTRVASISASLSVPLVYPRMFPIHNLLSKDIGGSILPLSLPLSSEH
IDSDGIFLLENGEDALIYAGKMVSPDMLQQLFGVQSVDDIPNNFLLQEYENDHSRKLNEL
VNEIRRQRCSYLRLRVCKRADPTEFLFFSLMVEDKNALGLSYVEFLVHIHRQIQTKMS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgggttctccagttcctccaggcgagcggcctggctatcctaattctacaggatatcct
tcacagagagcttttacaccagtgccttctgattcggcaggagctttggcgggtggcatg
caaaatctgaatatcaataggcctcccccaccaccatgggccactcaacaagctccaagg
ccaggtgcagcaccccaaggtatgcagaattctggtcctccatttgttccagccggaagt
cgtcctatgggcatgggtgtaccttttacttccacaaatcctcctcatgctccgcagtct
tcggcttcaccgttgggtgtcatgccgtctgggtctctggcggctagacctacaggaaga
cctgctgtaagacccgcaggcccaaattatggcggtgcaccgcctgtatcagcaccgaat
agtaatatgggaagacctgtaacgactccttttgtccaaagacccaatgccccaccttcc
aggccacctggagcaatgccagtgcaagatgggttggggtccccgtttgcacctggattg
aatgtgaattcttctaatcaagggataaatggaacttcgccttttgttcagggggctcct
cccatgcggcctcctttctctcaaggagccaatgctatgcattcaccagctgggtttcca
agaagttctgggcctacagctgcttcaggagctggcacagttccaaatgctcagcgaccg
ctggcatcggcagttccaccaccacaaattccttctgctagccataccccatcacctgct
ccaccaaatacatttcctgcccctggtcttgctccatcatcagtgccaccacctcctttt
gctgttgcaagtcagagaggacctccatcgtcctcttctttatatgcagctcagccatgg
cggcctccatctcagcagcacaactatccagacagctatgtaccaccaccaccgccagta
gctggaaatcagactccagggatgtttggcatgccagcacctccaagacacctgagtcaa
actattccacctatgcctcctaccatgggccacccccctggatcaggtgtcttgggtatg
ggacaaccaggatcgcctgcaggagggcaagcatcaggaccttcacgcattgatccaaac
caaattccccgtccagtaccgaattcaacatcaataatatttgaaacccgtagcaacaac
caatctaatcttcctccttcggcaacaagtgatttcattgccaaggataccggaaattgt
agtccacgctatatgcgatgtactgttaaccagataccttgctcaggtgacctattaagt
acttcaggaatgcctttggctttgatggtgcagccatttgctctccctcatccttctgaa
gaagcagttcaggtagttgattttggtgaaaatggacctgttcgctgctcccgttgcaaa
ggatacataaaccctttcatgagatttgttgatcagggaaggcgattcatctgtaatttg
tgtggattcagcaatgagaccccccgagaatatcactgtaatctggggccagatggcagg
cgtcgggatgcagatgaacgaccagagctttgtagaggaactgttgaatttgttgccaca
aaggagtacatggtccgggatccaatgcctgctgtgtttttcttgcttattgatgtttct
atgaatgcaataaacactggagcaactgctgcagcgtgtagtggaattaatcgtgcaata
gcagacctgcctgagggtcctcaaacgaaggtaggcatagcaacatttgactccacgatt
catttctacaatttgaaccgcgcttttcagcagccttcgatgcttgtggttcctgatgtg
caagatgtgtacacccctcttcagacagagctcatcgtcccaatttctgagtgtcgtgaa
catgtagaacaacttttggagagtattccaacaatgtttcaacacaataagatccctgaa
tcagcttttggtgcagccatcaagggtgcctttcttgcaatgaaatccactggtggaaag
ctgctagttttccagtcagtactaccatctgttggcataggagctctttcagctagagaa
gcagaagggcgggcaaacacaattgctggggaaaaggaggtgcataaattgcttcaacct
gcagataagactcttaagaccatggcaatagagtttgctgaatttcaggtgtgcgtggat
ttatttcttacaagccaatcatatgtggatattgcgtcaataactgttgttccaaggact
actggtggacaggtttattattattatccattttcagctgttgctgactctgcaaaatta
tacaatgatttaagatggaacattacgagaccacaagggtttgaagcagttatgcgtgta
agatgcagccagggtttgcaagtacaagattacttcggcaatttttgtaagagaattccc
acagatgttgatcttgcagggattgactgtgataagaccataatggtcacctttaagcac
gatgacaagttccaagaaggttctgaatgttgctttcagtgtgcagtactttacacaaca
gtttatggcgaaaggcgaatacgtgttacaactctatcattgccgtgcactagtgtgctg
agtaatctctttcgtggggctgatttagatgcccaatttacttatttcttaaaacaagcg
ggcaatgaaattccaactacaccacttaagcaagtaagagatcaaatgacagagctttgc
attagcattcttcatacgtaccgcaagttttgtgcaacagcatcatcgtctggacagctt
attcttccagaagctcttaagctgttaccactctacacgttagctttaacaaaaggcact
gggctacgctctgatgtccgcattgacgaccgatcttattggcttactcgagtggcatct
atttctgcctccttatctgttccattagtgtatcctcgaatgtttccaattcataactta
ctatcaaaggacattggtggtagcattttgccattatcacttccactttctagtgaacac
atagatagcgatggtatctttttgctggaaaatggggaagatgctttaatatatgcagga
aaaatggtcagtcctgatatgctgcaacaactctttggagtgcagtcagttgatgacatc
cctaacaatttcttgttgcaggagtatgagaatgaccattccagaaaacttaacgaatta
gttaatgaaattaggcgtcagcggtgttcatacttacggttacgggtgtgtaaaagggca
gatccaacagagttcctattcttttccctaatggtggaagacaaaaatgctctcggatta
tcttatgtggagttccttgtacatattcaccggcaaattcagactaaaatgagctaa
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