KEGG   Cryptomeria japonica (Japanese cedar): 131069288
Entry
131069288         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131069288
  KO
K10803  DNA-repair protein XRCC1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131069288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131069288
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     131069288
SSDB
Motif
Pfam: XRCC1_N PTCB-BRCT BRCT
Other DBs
NCBI-GeneID: 131069288
NCBI-ProteinID: XP_059076914
LinkDB
Position
5:complement(731525907..731648526)
AA seq 591 aa
MGGEWKVQSCSSESPVHKADNVVREELYRIWQTEEPSEEAWLVLETDPPKPIERVEIVNA
GASLIELYGLPEDRSEEELLLSTQQVMTLKDLTNKTNRTRSFTYTIPQKLSPIAAEKRWK
QLRIICHQPFGTKEHRACIGLSRIDVISCNTEANSLQPIGETSMPQEVRKLKECSTDKQP
GVNSSDSSVTCSTNERLIDYKNGKGDVKKRKLPVWNVTTKNSAEDSNGFSGGDAGPSEER
KIKQISENSEGNAKNATGDHTGKGARIESKDNILSRDSKINSSSPKTTVQEKKQKISSNM
KDPTSNVIAASSSHGPILSGSSEVDKKEDRSQSKPDRGSFSALLDGVVFAMSGLVNPERG
NLRSQGLQMGAEYQPDWNSNCTLLACAFPNTPKFMQVKGDGGTIVSKGKAGSDLASGHCK
WYRSMILQPCREWISECYKKRKLVDIDPYLMHVGKPWRKLQPVNVSPVSPINEPDQMKKK
PPLHGKTISARINKKAKGMGEISSEKPDINPSEVQKWVVEDFNATVSWLENLPEKVEGIV
EKKTGEILKHKSRKDRKRSWKLEDKRCRSARLEPSIGKRAAEQEAKVHHQD
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgggtggagaatggaaagtgcagtcatgttcatcagagtcgcctgtacacaaggcagac
aatgtagtgcgagaagaactttacagaatttggcagaccgaggaaccttcagaggaagca
tggttggttcttgaaacagaccctccaaagcctattgagcgggtggaaatagtgaatgca
ggggcgtctcttatagagctttatggcttgcctgaagataggtctgaagaagaattatta
ttatccacacagcaggtgatgacacttaaggatcttaccaacaagactaataggaccagg
agttttacctataccattccccaaaaactttctcccattgctgcagaaaagaggtggaaa
cagctacgcattatatgtcaccagccatttggtactaaagaacatagagcatgcattggg
ttgtcaagaatagatgtaatttcttgcaacactgaggccaacagtttgcaacctattggt
gaaacttctatgccacaagaggtaaggaaactgaaagagtgctccactgataagcaacct
ggagtgaatagcagtgattcttcagtaacttgcagtactaatgagcgattaattgattac
aaaaatggcaaaggggatgttaaaaagcggaagctcccagtttggaatgttaccaccaag
aactctgcagaagattctaatggattctctgggggtgatgctggtccaagtgaagagagg
aagattaaacaaatatcagaaaattcagaaggcaatgcaaaaaatgctacaggtgaccat
actggaaagggtgcacgtattgaatctaaagacaatattctgtcgagagatagcaaaatt
aatagtagttctccaaagactactgtgcaagagaaaaaacaaaaaatatcaagtaatatg
aaagaccctacaagtaatgtgattgcagccagttctagtcatggtcccattttgtctggt
tctagtgaagtagacaaaaaagaagatcgaagtcaaagtaaaccagatcgtggatcgttt
tcagcccttttggatggtgtggtctttgccatgtctggtttggtgaatcctgaacgaggg
aatttacgatcacaaggcctgcagatgggcgcagaatatcaacctgattggaattctaat
tgcactcttcttgcttgtgccttcccaaatactcccaagtttatgcaggtgaagggggat
ggtggaactattgtttccaagggcaaagcagggagtgatctagcaagtggacattgcaaa
tggtatcggagcatgatcctgcaaccttgcagggagtggatctctgaatgttacaagaaa
aggaagcttgttgatattgatccttaccttatgcacgtgggcaagccatggaggaaattg
caacccgtaaatgtcagtccagtcagtcctattaatgaaccagaccaaatgaagaagaaa
ccaccattgcatggaaaaactatcagcgctaggatcaataagaaagcaaaaggcatgggt
gaaatcagcagcgagaaaccggatatcaatccttcagaggtacagaaatgggtggttgaa
gattttaatgccacagtgtcctggttagaaaatttaccagagaaggtcgaaggcatcgtc
gagaaaaaaacaggagaaatcttgaaacacaaatcgaggaaggatcgcaagcgaagctgg
aagctggaggacaaaagatgcagaagtgcaagattagaaccgagcattgggaagcgtgcc
gctgaacaagaagctaaagtccaccaccaggactaa

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