Cryptomeria japonica (Japanese cedar): 131069442
Help
Entry
131069442 CDS
T10556
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131069442
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131069442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
131069442
NCBI-ProteinID:
XP_057860846
LinkDB
All DBs
Position
5:852550484..852551797
Genome browser
AA seq
368 aa
AA seq
DB search
MVPLVILNLQATLSTSSPSYNVVDNCWRRDPNWAQNRMKLADCGVGFGSAAKGGKGGELY
TVTSPDDDAVNPLPGSLRYGVTRDGPLWIVFASDMKIKLEMPLFVASHKTIGARGSNVHI
SNGPCIRLLNVSNIIIHGLNIHDWKPSVAGDVNVSQYMSHEMMDTEDGDAISVVSSRDIW
IDHNCLSSCADGLVDVTLASTAVTISNNRFTHHDKVMLLGHSDDYTADKNMRVTVAFNHF
GPGLLERMPRCRHGYAHVANNNYEAWGIYAIGGSAKPMIRSEGNRFVSPNEEYKKQVTWR
ETPQGKSWLWKSVRDTFLNGAYFVPSGRGKALPLYQTGQQFKVADGRSVPILTQSEGALA
CATSRACI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgttagtcattctgaatcttcaggccaccttgtctacttcctccccctcatat
aatgtggtagacaattgctggagaagagatccaaattgggcacaaaacagaatgaaactt
gcagattgtggtgtgggcttcggaagtgcagccaagggaggcaaaggaggagagttgtat
acagtcaccagcccggatgacgatgctgtgaatccccttcccgggagtctcagatatgga
gttactcgcgatggtcctctatggatagttttcgccagcgatatgaagataaagcttgag
atgcccctgttcgtcgccagccacaagactatcggcgcaaggggctcaaatgttcacatc
agcaatgggccttgcatacgcctcctcaatgtcagcaacatcatcatccacggattaaac
atccacgactggaagccaagtgtagctggtgacgttaacgtctcacaatacatgagccat
gagatgatggatacagaagatggagatgcaatttcagttgtttcttcacgagacatttgg
atcgatcataactgcctctccagttgcgcagacggacttgtagatgtcacgcttgcttcc
accgcagttacgatttctaacaaccgcttcactcaccatgataaggtcatgcttctggga
catagcgacgattatacagctgataaaaacatgagagtgactgttgcgttcaaccacttt
ggacctggcttattggagcgcatgccaaggtgccgacatgggtatgcgcatgtggccaac
aataactatgaggcgtggggtatatacgccattggagggagtgccaagcctatgattaga
agcgaaggcaatcgctttgtgtcccccaacgaggagtacaagaagcaggtgacatggcgt
gagaccccccaaggaaagagttggctgtggaagtcagtgagggacacatttttgaacggg
gcatacttcgtcccatctggcagaggaaaagcacttcccctctaccagacaggccagcag
tttaaagttgctgatggaagatcagtacccattttgacccagagtgaaggagccctagcc
tgcgctacctcccgggcctgcatctaa
DBGET
integrated database retrieval system
