Cryptomeria japonica (Japanese cedar): 131069443
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Entry
131069443 CDS
T10556
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131069443
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131069443
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
131069443
NCBI-ProteinID:
XP_057860847
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All DBs
Position
5:852556665..852558011
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AA seq
379 aa
AA seq
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MEQRQRFFMAASMVPLIILNLQATLSTSSPSYNVVDNCWRRDPNWAQNRMKLADCGVGFG
STAKGGKGGELYTVSPDDDAVNPLPGSLRYGVTRDGPLWIVFASDMKIMLEMPLFVASHK
TIDARGSNVHISNGPCIRLLNVSNIIIHGLNIHDWKPSVAGDVLVSQSMSHEMMNTQDGD
AISVVSSRDIWIDHNYLSSCADGLVDITLASTAVTISNNRFTHHDKVMLLGHSDDYTADK
NMRVTVAFNHFGPGLLERMPRCRHGYAHVANNNYEAWGIYAIGGSANPMIRSECNCFVAP
NEEDKKQVTWRETPQGKSWLWKSVRDTFLNGAYFVPSDRGKALPLYQTGQQFKVANGRSV
PILTQSAGVLACATSRACI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagacaaagattctttatggctgcctccatggtaccgttgatcattcttaat
cttcaggccaccttgtctacttcctccccctcatataatgtggtagacaattgctggaga
agagatccaaattgggcacaaaacagaatgaaacttgcagattgtggtgtgggcttcgga
agtacagccaagggaggcaaaggaggagagttgtatacagtcagcccggatgacgatgct
gtgaatccccttcccgggagtctcagatatggagttactcgcgatggtcctctatggata
gttttcgccagcgatatgaagataatgcttgagatgcccctgttcgtcgccagccacaag
actatcgacgcaaggggctcaaatgttcacatcagcaatgggccttgcatacgcctcctc
aatgtcagcaacatcatcatccacggattaaacatccacgactggaagccaagtgtagct
ggtgacgttctcgtctcacaatccatgagccatgagatgatgaatacacaagatggagat
gcaatttcagttgtttcttcacgagacatttggatcgatcataactacctctccagttgc
gcagacggacttgtagatatcacgcttgcttccaccgcagttacgatttctaacaaccgc
ttcactcaccatgataaggtcatgcttctgggacatagcgacgattatacagctgataaa
aacatgagagtgactgttgcgttcaaccactttggacctggcttattggagcgcatgcca
aggtgccgacatgggtatgcgcatgtggccaacaataactatgaggcgtggggtatatac
gccattggagggagtgccaaccctatgattagaagcgaatgcaattgctttgtggccccc
aacgaggaggacaagaagcaggtgacatggcgtgagaccccccaaggaaagagttggctg
tggaagtctgtgagggacacatttttgaacggggcatacttcgtcccatctgacagagga
aaagcacttcccctctaccagacaggccagcagttcaaagttgctaatggaagatcagta
ccgattttgacccagagtgcaggagtcctagcctgcgctacctcccgggcctgcatctaa
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