Cryptomeria japonica (Japanese cedar): 131069682
Help
Entry
131069682 CDS
T10556
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03420
Nucleotide excision repair
Brite
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
131069682
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
131069682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131069682
NCBI-ProteinID:
XP_057861179
LinkDB
All DBs
Position
11:complement(256370563..256387252)
Genome browser
AA seq
1266 aa
AA seq
DB search
MMDMQEEDKLLLSSLGVVSANPDDIERHILSKAKNKEQEAEISQISAENSDGDIPEGGKQ
DRGSSLTKRSHIHAQLKVVEVEMAAVAAGLETVQNAASNNILFIEDSEGEKEDKELEFRE
NKPSLVEGSVLQHALATERLKSLKKKKGQLKKQLKAFEVEGKTQEPEEQGLFLDLGNEED
IVTKKTSHLIDKQRKVEKRNAYFQEDDEFDMALDAAASGLIETERDKLIRKGILTPFDQV
RGFERRVQRSRPQKICDKPVETGDVNLSIDSISRAAASMSVTAKRRSSTKLLDAEDLPKL
DPPTRPFRRLRKPINVKVFNEVEKPSKNHSSNLRKRKRPLPDQQWRNAASSDDEAWSHAD
HQEGNEDIMEKQKYMNKRQDGSDSANSDYEIEGDDEAIGDTEGPEEDIVTVEGGLKIPGK
IFDNLFDYQKTGVKWLWELHCQRAGGIIGDEMGLGKTVQVIAFLAALHFSGIYKPSLIIC
PVTLLRQWRREVRKWYPQFHVAILHNSVSASSVKSNKYKGTKMEDEDGEPINNDEEEVQT
VQGANKWDFLIKRTFESSSGLLITSYEQLRVLRDKLLDIEWGYAILDEGHRIRNPNAEIT
LLCKQLQTVHRVIMSGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAQFAAPIAIGGYANA
SPLQVSTAYKCAVVLRDLIMPYLLRRMKSDVNAQLTKKTEHILFCSLTKEQRTAYRAFLA
SSDVEQIFDGSRNSLYGIDILRKICNHPDLLEKDHSGKHPDFGNPERSGKMKVLSQILNV
WKDQGHRVLVFTQTQQMLDILENFLASEGLTYRRMDGLTPIKHRMALMDEFNESNHVFVF
ILTTRVGGLGTNLIGADRVIIFDPDWNPSNDTQARERAWRIGQTRDVTVYRLISRGTIEE
KIYHRQIYKHFLTNKILKNPQQRRFFKARDMRDLFTLQDDTDENGTETSSIFSELTGEAR
SHDQNEQQIQAKRPVNNQIDSTSCGTHNGDQGKSISRSKGKEKVVSKEETQEDESKMLKV
LLVNGIHSTMDHDAIIDINDEEKLKLDDEAAQVAQRAAEALRQSRMLRGQDGVSVPTWTG
KSGAAGAPTSIRRKFGSTVNCQLVSASKSTDRSSINGASSSQGALIGLAGISTGKALSSG
DLLARIQMNRESAIDAGLESQTLSGAGSSMINETQRIPSNRPMNGRIVPKSIQPEILIRQ
LCTFIQQNGGSVGSTKIVDHFKDRVPPKDLCLFKKLLKEIAILRKEGGQGEWVLKPDYQI
DKFGAG
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatgcaagaggaagataagcttttgctgagtagtttgggtgttgtatctgct
aaccccgatgacatcgagcgtcatatactttctaaggcaaaaaacaaagaacaagaggct
gagatcagccaaatttcagctgaaaatagtgatggcgatattcccgaaggagggaaacaa
gatcgaggaagttcgcttacaaaaaggtcccatattcatgctcagttaaaagtagtcgag
gttgaaatggctgctgttgctgcaggtcttgaaacagttcagaatgctgcaagcaataat
attcttttcatagaggattctgaaggtgagaaagaagacaaggagctggaattcagggaa
aacaagccttcgttagtggaaggatcagtgcttcagcatgctctggctactgaaagattg
aaaagccttaaaaagaaaaaaggacaacttaagaaacagttgaaggcttttgaggtggag
ggaaagactcaggaacctgaggagcagggtttgtttcttgatttagggaatgaagaagat
attgtcactaagaaaaccagccatttgatagataaacaacgaaaagtggaaaagaggaat
gcttattttcaagaggatgatgagtttgatatggcattggatgcagcagcttcagggcta
attgaaactgaacgtgataaactcatccgaaaagggattttaacaccttttgaccaagtc
agaggttttgagcgtcgggtacaaagatctcgcccacaaaaaatctgtgataaaccagtt
gagaccggtgatgtcaatctttcaatagattctatctccagagctgctgcgtcaatgtct
gtaactgctaaacgtcgatcatcaacaaagttgcttgatgcagaagacttgccaaagttg
gatcctcccactcgtccatttcgaagacttagaaaacctatcaatgtcaaagtgttcaat
gaggttgagaaaccttcaaaaaatcactcaagcaatttaagaaagagaaagcggccttta
cctgatcaacaatggaggaatgctgcatctagtgatgatgaagcgtggagtcatgctgat
catcaagaaggcaatgaagacattatggaaaagcagaaatacatgaataaaagacaggat
ggttcagattcagcaaactctgattatgagattgaaggtgatgatgaagctataggagat
actgaaggtcctgaggaagatattgtaactgttgaaggaggattgaaaattcctgggaag
atttttgacaatcttttcgattaccagaaaacaggtgtaaagtggctgtgggagttacat
tgccagagggctggtggaataataggagatgaaatgggtcttgggaaaacagttcaggtg
atagcatttctggcggctttgcatttcagtggtatttataagcctagtttaattatatgt
ccagtaactcttttacgccaatggagacgggaagttcgaaaatggtacccacagttccat
gttgcaatattgcataattctgtttcagcatcttctgtaaaatcaaacaagtataagggt
acaaaaatggaggatgaagatggagaaccaataaataatgatgaggaggaagtccagact
gttcaaggtgcaaacaagtgggattttctaattaagcgaacttttgaatctagttctggg
ttgcttatcacctcttatgaacaacttagagtattaagggacaaattgctggatatagaa
tggggatatgccatattggatgaagggcaccgcataagaaacccaaatgctgaaatcacc
cttttgtgcaaacaactgcaaactgtgcatcgcgttataatgtcaggtgccccaattcag
aacaagcttacagagttgtggtctttgtttgactttgtttttcctggaaagctgggagtc
ttacctgtatttgaggctcaatttgctgcacctattgcaattggtggttatgccaatgca
tcaccattgcaagtatctactgcttataaatgtgctgttgttcttagagaccttataatg
ccttacctgttacgccgtatgaaatcggatgtaaatgcacaacttacaaagaaaacagag
catattctcttctgtagcttgactaaagaacagcgcacggcatatcgtgcttttcttgca
agttctgatgtggagcaaatatttgatggcagtagaaattcactttatggaatagatata
ctgcggaaaatatgtaatcatcctgatttgcttgaaaaggaccatagtggcaagcatcca
gattttgggaatccagaacgcagtggcaagatgaaggtgctttcccaaattttgaatgtt
tggaaagatcaaggccaccgggttctggtttttactcagacacagcaaatgctggacatc
cttgaaaattttcttgcctctgaaggtcttacctatcggcgaatggatggattgactcct
atcaaacatcgtatggccttaatggatgaattcaatgagtctaatcatgtttttgtattt
attttaactacaagggttgggggcctgggaacaaatttgattggtgctgacagagtgata
atttttgatccagattggaatccttcaaatgacacacaggcaagggagcgtgcttggcgt
ataggtcagacacgagatgtgactgtctatagactaataagccgtggaacaattgaggaa
aaaatttatcatagacagatatataagcatttcctgaccaataagatcctcaagaatcca
cagcagagaagattcttcaaggcaagagatatgcgggatctctttactttacaagatgac
acagacgagaatgggacagaaacatctagcatttttagtgaattgactggagaagcaagg
tcacatgatcagaatgaacaacaaatacaagcaaagcgtcctgtcaataatcaaattgat
agtacatcttgtggcactcataatggggaccaaggcaaaagtatatccagaagcaagggt
aaagaaaaggttgtgtctaaagaagagacgcaagaagatgaatcaaaaatgctaaaagtt
cttctagtcaatggaattcatagcactatggatcacgatgctattattgacatcaatgat
gaagagaagctgaagcttgatgatgaagctgctcaagttgcccaaagagcagctgaagct
ttaagacaatcgcggatgcttcggggtcaagatggtgtgtcagttccaacatggaccggt
aaatctggtgctgcaggtgctccgacttccataaggagaaaatttggatcaacagtaaat
tgccagttggtgtcagcttcgaagtctactgatcgatctagtatcaatggagcaagtagc
tctcagggtgctttgataggacttgctggaatttctacaggaaaagccttgagctcaggt
gatcttcttgcacggatacaaatgaatagagaaagtgctatagatgctggcttggagtcc
cagacgttatcaggagctggctctagtatgataaatgagactcaaagaataccaagcaac
aggcccatgaatggtcgaattgttccaaaatctattcaacctgaaatcctaattcgtcag
ctatgtacattcatacaacagaatggtggatctgtggggtcaactaaaattgtagatcat
tttaaagacagggttcctccaaaagatttgtgtttgttcaagaaacttttgaaagaaatt
gctatcctgagaaaagaaggtggacaaggtgaatgggtattaaaaccagactaccagatt
gacaaatttggtgctgggtga
DBGET
integrated database retrieval system
