Cryptomeria japonica (Japanese cedar): 131069736
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Entry
131069736 CDS
T10556
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04144
Endocytosis
cjf04517
IgSF CAM signaling
cjf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131069736
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131069736
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131069736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131069736
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjf04812
]
131069736
Membrane trafficking [BR:
cjf04131
]
Others
Actin-binding proteins
Arp2/3 complex
131069736
Cytoskeleton proteins [BR:
cjf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
131069736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
WDR55
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
eIF2A
RMC1_N
Tricorn_2nd
BNR_3
WDR90_beta-prop_4th
DUF1131
Motif
Other DBs
NCBI-GeneID:
131069736
NCBI-ProteinID:
XP_057861255
LinkDB
All DBs
Position
11:complement(270783725..270944136)
Genome browser
AA seq
383 aa
AA seq
DB search
MAAVAAHQLSQCITCHAWNAELSMVAVCPNNSEVHIYKASPDGSSIWNRIHILQKHDQLI
SGIDWGMRSNKIVTVSHDRNSYVWSLEGVEWLPTLVILRLNRAAICVKWSPRENKFAVGS
GAKSVCICYYEQDNNWWVSKLIRKKHNSSVTSVAWHPNNVLLATSSADGKCRVFSTFIKG
VDTRDSTVSPFCDMKFGEQVVQLDLAYSWAFGAKWSPSGNSLAYVGHSSTIYFIDDVGPS
AVAQEVAFRDLPLRDILFLSEKMVVGVGFDCNPMLFAADSNGTWSFVKFLDEKKSTATTS
KYGSQFSEAFGKFYGQAKHGSNVDSVEPSRAPGGSHENCITCIVPLPHPGETTLRHFSTS
GMDGKVVIWELNDLDSHFSQLAL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtggcagctcaccagctgagtcagtgcatcacttgccatgcttggaatgcg
gaactttccatggttgctgtttgccctaacaacagtgaagtgcatatttacaaagcatca
ccagatggcagttctatatggaatagaatacatattcttcagaagcatgatcaacttata
tcagggattgactggggtatgagatcaaataagattgttactgtgtcacatgatagaaat
tcgtatgtttggagcttagagggtgtggaatggttgccaacacttgtgattctcagactc
aatcgtgctgctatttgtgttaagtggagtccaagagaaaacaagtttgctgttggaagt
ggagctaaaagtgtttgtatttgctattatgaacaagataataactggtgggtcagcaag
cttatcaggaaaaaacacaactcatctgtgacaagtgttgcatggcacccgaacaatgtt
cttcttgcaacaagttctgcagatggaaagtgccgtgtattctctacattcatcaaagga
gttgatacaagggattcaacagtcagccctttttgtgacatgaagtttggcgagcaagtg
gtgcagctggatcttgcttacagttgggcttttggggctaagtggtctccaagtggtaac
agcttagcttatgtaggacatagttcgacaatatatttcattgatgatgtggggccatcg
gcagtggcccaggaagtagcgtttcgggacttgccacttcgtgatatattgtttctctca
gagaagatggtggtgggtgtagggtttgattgcaacccaatgctatttgcagcagacagc
aatgggacatggagctttgtaaaatttcttgatgaaaaaaaatcaactgcgactacttca
aaatatggctcacagttttcagaagcttttggaaagttttatggtcaggcaaaacatggg
tcaaacgttgattctgttgaaccatccagggctcctggaggatcgcacgagaattgcata
acctgcattgttccactaccacatccaggtgaaacaactctaaggcatttcagcacctca
ggcatggatggtaaagtggtcatctgggaattgaatgatttggatagccatttttcacaa
cttgcactgtaa
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