KEGG   Cryptomeria japonica (Japanese cedar): 131070377
Entry
131070377         CDS       T10556                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131070377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131070377
   03041 Spliceosome [BR:cjf03041]
    131070377
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131070377
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131070377
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131070377
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 131070377
NCBI-ProteinID: XP_059074443
LinkDB
Position
3:605006362..605009191
AA seq 382 aa
MGSSKDNGSPSSNGDSAADNNDAAIENSQEENNNNNNETNASSRDKDTSSPGKIFIGGLS
RDTTPAAFTKHFSKYGELTDSVIMKDRVTGQPRGFGFVTYADPSVVDKVIQDKHVLDGRT
VEIKRTIPRGNSTSKGPKTKKIFVGGIPTSITEDEFKEYFAKFGKIVEHQIMQDRSTGRS
RGFGFVTFESEQVVEEIMSQGRMFELGGKQVEIKKAEPKKPLPDAGPAFGIDGRAPYFPG
PAGGFRDSYSGLGGPVYGSNPYRAGGGYGGRAGGFGGYGAPEYGRGYGGYGGSSLGGYGE
DTSRGYGGQIGSFGEGYGGYGGGMMGGYGATADAYGSYSGGGGYGGSFDSRVGGPYGSGG
SYGGGRGAYGGSSNGRYHPYAR
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgggttcttcgaaggacaacggatcaccttcttccaatggcgattctgccgcagataac
aatgatgccgccattgaaaattcgcaagaagaaaacaacaataacaacaatgagactaac
gcttcttccagagacaaagacacttctagtcctggaaaaatcttcattggaggtctgtca
agggatacaacaccagctgctttcaccaagcattttagcaagtatggggagctaacagac
tcagttattatgaaggaccgtgtcactggacagcctcgtggatttggatttgtgacttac
gctgacccttctgttgtagacaaggtcattcaggacaagcatgttctagatggaaggacg
gtggagattaagagaacaattccaagaggcaactccacttccaagggccccaagacaaag
aaaatttttgtcggtggcataccaacatcaattacggaggatgaattcaaggaatacttt
gccaagtttggcaagattgtagaacatcaaattatgcaggatcgaagtactggtcgctcc
aggggttttggttttgtaacctttgaaagcgagcaggttgtagaagagataatgtctcag
ggcagaatgtttgagctaggtggaaagcaggtggagatcaagaaagctgaacctaagaaa
cctttgcctgatgctggacctgcatttgggattgatggtagggctccttattttcctggg
cctgctgggggcttcagggatagttatagtgggcttggaggaccagtttatggaagcaat
ccatatagggcaggaggaggttatggtggtagggctggaggttttggcgggtatggagct
cctgaatatggtaggggttatggaggctacggtggcagcagtctaggaggctatggagaa
gacacttctcgtggttatggaggtcagattggctcctttggtgaaggctatggtggctat
ggtggtggaatgatgggtggctatggtgccactgctgatgcttatggttcctacagtggt
ggtggtggctatggtggcagctttgactctcgggttggtggtccatatggtagtggtggt
tcctatgggggaggtaggggtgcgtatgggggtagtagcaatggccgttatcacccatat
gcaaggtag

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