Cryptomeria japonica (Japanese cedar): 131070424
Help
Entry
131070424 CDS
T10556
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131070424
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
131070424
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
131070424
Prokaryotic type
131070424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
131070424
NCBI-ProteinID:
XP_057861920
LinkDB
All DBs
Position
3:complement(426876522..426926247)
Genome browser
AA seq
1056 aa
AA seq
DB search
MAHLNSLLQSALRPLQNTAPFSPLKSLLKKPTKSIFQNPEIHSVISIKLFSRVVFAATGG
RGRGSGHLKQYKRGISVRKEGSTGVRKRSSEMDEEEPKDYNKKRMEGLDKAGPKQVKLKT
RNINPVNTIAYVQILGTGMDTHDTSPSVLLFFDHQRFIFNAGEGIQRFFTEHKLKLSRLD
HIFLTRVCSETAGGLPGLLLTMAGIGDNGMTVNMWGPSDLEYLLDAMRLFIPNSAVIHTH
SFGPRHESEGSEVPQTSHGSISTQPIVLYKDELVQISAVLLLPSGVGRHHQEMEVGIEVS
EGTNNDTGKNMESTPKRPRLGSEASSKIAGTAMKLQENYEPGDIAVVYICELPDIKGKFD
PSKARALGLKPGPKYRELQLGKSVMSDTGDAMVHPSDVLGPSFPGPIVLFVDCPTISHFP
DLLSAPVLSKFFTRMDDGYQNIQKHVSCFVHLSPSSVTKCPEYVEWMSKFVGAQHIMAGH
ELKNTGYPILKSSARLSTRLNFLCPQLFPVPGFRSLGVANTLEGASAQTSQDEDMMFHGF
VLADNLLKFYLRPYARLGLDQSSVPSLPSASDIIGELVLEIPEIVDASKQIAQIWNSVPG
EHNEYPNHTELHGPTFVEEPWITESTSISELELKVTNNGDAQKETQFKLPLGVNGCKGTE
AIPMCLEGVSRDEMEIVFLGTGSSQPSKYRNVSSIFVNLFRKGGILLDCGEGTLAQLKRR
FGVNGADDVIKSLKCIWISHIHADHHTGIARILSVRKHLLQNRSHESLLVIGPKPLRRFL
NAYSRLEDLNMHFLDCRQTMKDSIDMYERIYADMQDEVGSGESSGSKQENSVVSNLVSLK
TENREAPHSIQSQMQNYAQRLGVQDGTVLDLAGLHKLKKILSEAGIEVLHSVPVVHCREA
FGVVLQAIRRKNNVNEIVPGWKLVYSGDTRPCKKLRDAAFGATVLIHEATFDDSMPEEAI
SKNHSLTKEAIEVGASAEAYRIILTHFSQRYPKIPVFDESYTDRTCIAFDLMTVNLADLP
FVPKINSFLKLLFKNEMMAEESSEIDNMTENTAITL
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggctcatctcaattctttgctgcagtcagctcttcgtcccttacaaaataccgctcca
tttagtccacttaaatctttattgaagaaacccactaaatcaatatttcaaaatcccgaa
atccactctgtaatctccattaaacttttttctagagttgtttttgctgctactggagga
aggggacgaggaagcgggcatctcaaacaatacaaaagagggatatctgtaagaaaagaa
ggctctaccggtgttagaaaacgaagttcagaaatggatgaggaggaacccaaagattat
aataaaaagaggatggaagggctggataaggcaggtcccaagcaagttaagctcaagact
aggaacataaatcctgtcaatactattgcttatgtgcagattcttgggactgggatggac
acccatgacacatctccttctgttctgttgttttttgatcatcagcggttcatcttcaac
gctggagaggggatacaacggttctttactgaacacaagttgaagttatcaagattggat
cacatattccttactcgggtttgctcagaaactgcaggtggtcttccaggccttcttttg
accatggctggcataggagataatggaatgacagtcaacatgtggggcccctctgatctg
gaatatttattagatgcaatgcggttgtttattccaaattctgctgtcattcatacccat
agttttggtccaaggcatgaatcagaaggtagcgaagtgcctcagacttctcatggaagc
atatcgacacagccaatagtactttacaaagatgagcttgtacaaatatctgctgttctt
ttactccctagtggcgtaggaagacatcatcaggaaatggaggttggtatagaagtttca
gaggggactaataacgacacaggaaaaaatatggagtcaactcctaagcgtcctcgttta
ggatcagaagcatcgtcaaaaattgcaggaacagccatgaaactccaggaaaattacgag
cctggtgatattgctgttgtgtatatctgtgagttacctgatatcaaaggaaaatttgac
ccatcaaaggctcgagcacttgggctaaaacctgggccaaagtaccgtgaactccagctt
ggaaagtcggtgatgtcagatacaggtgatgcaatggtacatccaagtgatgtgttgggt
ccatcatttcctggtcctattgtcctctttgttgattgcccaaccatttcacattttcca
gatttactgtctgcacctgtgctaagtaaattctttacgcgcatggatgatggctatcag
aacattcagaaacatgtcagttgttttgttcaccttagtccttcttctgtcactaaatgt
ccagagtatgtagaatggatgtcaaaatttgtgggcgctcaacatattatggctgggcat
gaattaaagaatacaggatatccaatattgaaatccagtgcaagactttcaacacgactt
aatttcctttgcccacaactgtttcctgttcctggttttcggtctcttggtgtagcaaac
accttggaaggagcttctgctcaaacaagccaggatgaggatatgatgttccatggattc
gttcttgctgataatctactgaagttctacttacgtccttatgcacgacttggtttggat
caatcttctgttcctagtttgccctctgcatctgatataattggtgagctggtattagag
attcccgagattgtggatgcttccaaacagattgcccagatctggaattctgttccagga
gagcataatgaatatcctaatcacactgaattgcatggtcctacttttgtagaagagcct
tggataacagaaagtacaagcatatctgaattggaattgaaagtaacaaataatggcgat
gcccaaaaggaaacacaattcaaactcccacttggagttaatggttgtaagggcactgaa
gccattcctatgtgcttagaaggtgtaagcagggatgagatggagatagtctttttgggt
acaggctcctctcagccatcaaaatatcgtaatgtcagttctatctttgtaaaccttttt
agaaagggtggtatacttttagattgtggagagggaactttggctcaactgaaaaggaga
tttggtgttaatggtgctgatgatgtgatcaaatctttaaagtgtatatggatatcacat
attcatgctgatcatcacactggaattgcaaggatactgtctgtgcgtaagcatttatta
cagaacagatctcatgaatcattactggtgattggaccaaagccactgaggagattcttg
aatgcatactctaggcttgaggacttaaacatgcatttcctggattgtagacagacaatg
aaggattcaattgatatgtatgaacgaatatatgctgatatgcaggatgaggtgggcagt
ggtgaaagttcaggatctaaacaagagaattcagttgttagcaatctggttagtttaaaa
acagaaaacagggaagcaccacattctatccagagtcaaatgcagaattatgcacaaaga
cttggagttcaagatggaactgtattggatctcgcaggactacataagctgaagaaaatt
ttgtctgaagctgggatagaggttttacatagtgtacctgttgttcattgcagagaagca
tttggtgttgtcttgcaagctataagaagaaagaataatgttaatgaaatagtgccaggg
tggaagcttgtttattctggtgataccaggccttgcaagaagctcagggatgccgctttt
ggggccactgtactgatacatgaggccacttttgatgatagcatgcctgaagaagcaatt
tcaaagaatcatagtttgaccaaggaagcaattgaggtgggagcctctgctgaagcatac
agaatcattttgacgcactttagccagcgttaccccaaaatccccgtttttgatgaaagc
tatactgacaggacatgcattgcttttgacttgatgactgtgaacttggcagacttgcca
tttgtaccaaaaattaattcttttttgaaacttctcttcaaaaatgagatgatggctgaa
gaatcatctgagatcgataacatgactgagaatacagctattacattataa
DBGET
integrated database retrieval system
