Cryptomeria japonica (Japanese cedar): 131071143
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Entry
131071143 CDS
T10556
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131071143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131071143
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131071143
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
U-box type E3
131071143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
MLKL_N
MCAfunc
Arm_2
zf-RING_UBOX
Nucleoporin_C
zf-Nse
zf-C3HC4_4
RPW8
Cnd1
DUF7792
zf-C3HC4_2
zf-C3HC4
KAP
zf-rbx1
Neurochondrin
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
131071143
NCBI-ProteinID:
XP_057862838
LinkDB
All DBs
Position
8:506721946..506729192
Genome browser
AA seq
645 aa
AA seq
DB search
MSGEAPELEVEGDVVESVMEAVNEITGIGGECRSVFKKECANLNRRIKLLTPMFEELKET
KDPLPQETLEVLKSLQEALKSVKELLRFCHEGSKLYQVLEREQLASKFWEVTTQLEEALS
GLCYEELDLSDEVREQVELVHAQFKRAKGRADAPDSELHEDLSTVLSQRSDKDVDQMVLK
RLSEKLQLKSIADIKQESLALHTMVTESEGDPGERLEQMSDILRRLKDFVLTENPEMDAP
DNEKGSHTCTALTEKSSSPVIPDDFRCPISLELMKDPVIVATGQTYERVCIQKWLDSGHR
TCPKTQQMLPHIVLTPNYVLRSLIAQWCESNGIELPKRSSSSRCGKSCGSVLDNSGDRAT
VDVLLQKLSVGTLEEQRAAAGELRLLAKRNADNRICIAEAGAIPLLVNLLSTPDGRTQEH
AVTALLNLSIYENNKGAIVMAGAIAPIVEVLKNGSMEARENAAATLFSLSVVDENKITIG
ASGAIPALVGLLREGSQRGKKDAATALFNLSIYQGNKARAVRAGVVAPLMQLLVDPSAGM
VDEALAILAILASHQEGKIAIGNADAIPILVDIIRTGSPRNRENAAAVLLALCTNDPQNL
IVIKDLGALEPLTDLAQNGTARAKRKAVSLLEHMNKPEQVPSSQS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaggcgcctgaattggaggtggagggggatgtggtggagagtgtaatggag
gcagtgaatgagatcacagggattgggggagaatgcaggagtgtatttaagaaggaatgc
gctaatcttaacaggcggataaaattgctaacacccatgtttgaggaacttaaggagaca
aaggacccattgccacaggaaacattagaagtcctcaaatccttgcaggaggccctaaaa
tctgtcaaagaattgcttagattttgtcatgaaggcagcaagttgtatcaggttctagaa
agagagcaacttgcaagcaaattttgggaagttactactcagttggaggaagctctcagt
gggttgtgttatgaagaacttgacttatcagatgaagttcgagaacaggttgaactggta
catgctcagtttaagagagcaaaaggacgggctgatgcacctgattcagagcttcatgaa
gatctttctacggtactgtctcagagaagtgacaaagatgttgaccagatggtcctcaaa
agactgtcagaaaagttacaactcaaaagcattgctgatattaagcaagaatcactagca
ctacataccatggtgactgagagtgaaggagacccaggagagagattagagcagatgtca
gatattttgaggaggttaaaagactttgtcttgacggagaatcctgagatggatgctcct
gacaatgagaaaggctctcatacctgtactgctcttacagagaaatctagctcccctgtt
atccctgatgattttcgctgccctatatctctagagctaatgaaagatcctgttattgtg
gctaccggacagacatatgagcgggtttgcatacagaaatggttggattcaggacataga
acttgtcccaagacacaacagatgctgccacacatagttttgacaccaaactatgtattg
cgaagtctgattgcacagtggtgtgaatccaatggtattgagctaccaaagagatcaagc
tctagcagatgtggaaagtcatgtggatctgtattggataactctggtgaccgagccact
gttgatgttcttctccaaaagctgtcagttgggactcttgaagaacaaagagcggcagct
ggcgaattacgccttctagcaaaaaggaatgctgataacaggatttgtatagcagaggcc
ggggccattcctttactagttaatcttctgtccacaccagatggaagaacacaagagcat
gctgtgacagctctacttaacctttccatttatgaaaacaataaaggggcaatagttatg
gctggggcaattgctccaattgttgaggttctcaaaaatggtagtatggaagcaagagaa
aatgctgctgcaactctctttagcttgtcagttgtcgatgagaacaagataacaattggt
gcatctggagcaatacctgctctggttggcttgcttcgtgaggggagccagagaggtaag
aaagatgctgctacagcactatttaatttatcaatctatcaaggtaacaaagcaagggcc
gtgagggctggagttgtggcccctttgatgcaattacttgtagatcctagtgcagggatg
gttgatgaagccctggccattttggctattcttgcaagtcaccaagaaggtaaaatagcc
atcggaaatgctgatgctattccaatattagtggatataatcagaactggttcacctcga
aaccgggaaaatgcagcagctgtcttacttgcattgtgcacaaatgatccccaaaatcta
attgtaatcaaagaccttggagctttagaacccttaacagatttggctcagaatggcaca
gcaagagccaagcgcaaagcagtttctctattagagcatatgaacaagccagagcaagtc
ccaagtagtcaatcttag
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