Cryptomeria japonica (Japanese cedar): 131071186
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Entry
131071186 CDS
T10556
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020
RNA polymerase
cjf03420
Nucleotide excision repair
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131071186
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131071186
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131071186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131071186
NCBI-ProteinID:
XP_057862888
LinkDB
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Position
7:661644470..661666986
Genome browser
AA seq
1210 aa
AA seq
DB search
MYGVEDEEEYGNNSVSVNEEEDGDGEEEVEQMEVDDGREEITQEDAWVVISAYFDEKGLV
RQQLDSFDEFIQNTMQEIVDESADIEIKPESQHNPGRQADFTETVFKISFGQIYLSKPMM
TESDGETATLFPKAARLRNLTYSAPLYVDVTKRVFRKGFDCEELAEKQDLTKVFIGKVPI
MLRSAYCTLSPTNEKDLHELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPN
KFSYVAEVRSMAEAQNRPPSSMFVRMLSRASAKGGSSGQFVRATLPYIRSDIAIIIVFRA
LGFVADKDILEHICYDFSDAAMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKR
IKYAKDILQKEMLPHVGVGEHSETKKAYFFGYIIHRLLLCALGRRPEDDRDHYGNKRLDL
AGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQFAIKAKTISSGLKYSLATGNWGQ
ANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPE
GQACGLVKNLALMVYITVGSSANPILEFLEEWSTENFEEISPAAIPTSTKIFVNGCWVGI
HRDPELLVRTLRQLRRQVDVNPEVGVVRDIRLRELRLYTDYGRCSRPLFVVENQRLKIRK
IDINNLQASREEGWHELITQGCIEYVDTEEEETTMISMTINDLVNARTNPEDAYSHTYTH
CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQ
KPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR
DEEKRAGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQ
DDSAGQVSRYTKRDQSTSLRHSESGMVDQVLLTTNQDGLRFVKVRMRSVRIPQIGDKFSS
RHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEG
DATPFTDVTVDSISKALHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDK
IHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHV
CEHCGLIAIANLKKNSFDCRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMFTKEVKQ
LKDQKKKAGA
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtatggcgtggaggacgaggaggagtatgggaacaacagtgtgagtgtaaacgaggag
gaggatggagatggagaggaggaggttgaacagatggaggtggacgatgggagggaggag
ataacacaggaagatgcgtgggtggttatcagtgcctacttcgatgagaagggcctggtg
cgccagcagctcgactccttcgacgaattcattcaaaatacaatgcaggaaatcgtggac
gagtcagcggatatcgagattaaacccgaatcgcaacataaccctggcagacaagccgac
ttcactgagactgttttcaagataagctttggtcaaatatatctgagcaaacctatgatg
acagaatctgatggggaaacagctactttatttcccaaagcagctcggttaaggaatttg
acctactcagccccactatatgttgatgtcactaaacgtgttttcagaaaaggattcgac
tgtgaagagctagcagaaaaacaagatcttacaaaagtgtttattggaaaggtaccaata
atgctgcgctctgcatattgcacgttatctccaacaaatgagaaggatctccatgagctt
ggggagtgtccatatgaccagggtggatacttcataataaatggcagtgaaaaggttcta
attgctcaagaaaaaatgagcacaaatcatgtctatgtttttaagaaacgtcaaccgaat
aaattttcttatgttgctgaggtcaggtctatggctgaagcacaaaacaggccacctagt
agcatgtttgtgcgcatgctttcaagagcaagtgccaaagggggttcatctgggcagttt
gttcgagcaacattgccttatattcgttcagatattgcaattattattgtttttagagcc
cttgggtttgttgctgataaagatattctagagcatatatgctacgactttagtgatgct
gcgatgatggagttgttgagaccatcattggaggaggcatttgtaattcagaaccagcag
gttgccttggattacattgggaagcgagggtcaactgttggtgttactagagaaaagcgt
ataaagtatgccaaagacattcttcagaaggaaatgctgcctcatgttggtgtaggagag
catagtgaaactaagaaagcttatttttttgggtacatcatccatcgacttttattatgt
gctcttggtcgtcgaccagaggatgacagagatcattatggaaacaaaagattggaccta
gctggccctctacttggaggactgtttagaatgcttttccgaaagctgaccagggatgtg
aggtcctatttgcaaaagtgtgttgattctgggaaagatgtgaatctacaatttgcaatt
aaagcaaaaacaatttctagtggcctaaaatactccttagctactggaaactggggtcaa
gcaaatgcagccggtacaagggctggagtgtcacaggttttgaatcgtctgacatttgca
tcaaccctatcacatttacgtaggttgaactctccaattggacgtgaaggtaagctggca
aaacccagacagttacataattcacactggggcatgatgtgtcctgcagaaactcctgaa
ggacaggcttgtgggctagtgaaaaatttggccttaatggtttacatcaccgttggttca
tctgctaatccaattctggagtttctagaagaatggagcacagagaattttgaggaaata
tctccagcagccattccaacatcaacaaaaatatttgtaaatggttgttgggttggaatt
caccgtgatcctgagcttttagtgaggactctgagacagctgagaagacaggttgatgtc
aacccagaagtaggagttgttagagacattcgcctaagggaattaaggctatatactgat
tatggccgctgcagtcgaccactatttgttgtggagaatcaacgtttgaagataaggaaa
atagacatcaataatttacaggctagtcgggaagagggatggcatgaacttatcacacag
ggttgtattgagtatgtggatacagaagaagaggagacgacaatgatttccatgacaatc
aatgaccttgtgaatgcaagaactaacccagaagatgcttattctcatacgtacacccac
tgtgaaattcatccgtcgttgattttgggtgtttgtgcatcaatcattccattccctgat
cataatcagtctcctcgtaatacataccagtctgccatgggtaaacaagcaatgggaatt
tatgttactaattaccagctacgaatggatactttagcatatgtactctattatccacag
aagcccctggttactactagggccatggagcatctacacttcaggcagctaccagctgga
attaatgcaattgtcgctatttcctgctattctgggtataatcaggaagattctgttatc
atgaatcagtcttcgatagatcgtggattctttcgttcactgttttttcggtcctacaga
gatgaagaaaaaagggcagggacactagtgaaggaggaatttggtcgtccaaacagggag
aatacaatgggtatgcggcatggttcgtacgataaattggatgatgatgggcttgctcct
cctggaaccagggtttcaggagaggatgtgattattggtaaaacaactcccatagcacaa
gatgattcagcaggtcaggtatcaagatacacaaagagggatcagagcacaagtttgcgt
catagtgaaagtgggatggttgatcaggttctgttgacaaccaatcaggatggcttgcgg
ttcgttaaagttagaatgagatctgtccgtataccacaaattggggataagttcagcagc
agacatggtcagaagggaactgtaggcatgacatatactcaggaggatatgccctggaca
gttgagggcattacacctgatattatagtcaatccacatgctattccttctcgtatgact
attggccaactcattgagtgtatcatgggaaaggttgctgctcacatgggaaaagaggga
gatgcaacacctttcactgatgtcactgttgacagtatcagcaaggcacttcataaatgt
ggataccagatgagaggttttgagacaatgtataatggacacactggcagaaagttgagt
gcgatgatttttctaggtcctacatattaccaacgtttaaagcatatggtggatgacaag
atccattctcgtggccgtggacctgttcaaattcttactcgacagccagcagaaggacgc
tcccgtgatggaggtttacgttttggagagatggagcgtgattgtatgatagcacatgga
gctgctcattttctcaaagaaaggctttttgaccaaagtgatgcatataggatccatgtt
tgtgagcactgtggcttaattgctattgcaaacttgaagaaaaactctttcgattgtaga
ggctgcaagaacaaaacagacattgttcaggtgcacattccatatgcttgtaagctactt
tttcaagaacttatgtctatggccattgccccaagaatgttcacaaaagaagtgaaacaa
ctgaaagatcaaaagaaaaaggcaggagcttga
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integrated database retrieval system
