KEGG   Cryptomeria japonica (Japanese cedar): 131071741
Entry
131071741         CDS       T10556                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03082  ATP-dependent chromatin remodeling
cjf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131071741
   03083 Polycomb repressive complex
    131071741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjf03036]
    131071741
Enzymes [BR:cjf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131071741
Chromosome and associated proteins [BR:cjf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131071741
   HDAC complexes
    Sin3A-HDAC complex
     131071741
    BRAF-HDAC complex
     131071741
    REST complex
     131071741
    SHIP complex
     131071741
    MiDAC complex
     131071741
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131071741
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131071741
  Chromatin remodeling factors
   NuRD complex
    131071741
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131071741
NCBI-ProteinID: XP_057863672
LinkDB
Position
8:608123820..608127708
AA seq 416 aa
MEAGGISLSSGSDGIGRKISYSYDPDVGTYYSGHGNARKPHLIRLTHSLFVAYGLYKEME
VVRPCHAGDRDLTKLHAFLSGIAPETVQDQAQALERFNVGGNCPAFNGLYRYCQTYASGS
IGCAARLNFKLCDIARGHSHAKKCEASGFCYVNDIFLSILELLKYQKSVLYVDIDVHHGD
GVEKAFYTTDRVTTVSLHKFGDYFPGSGHIQNIGYGKGKYYALNVPLNDGIDDENLKSIF
KSILQQVMIVYDPEAVVLQCGANSLAGDRLGYFKLSVKGHAECILRYMRSFNVPRLLLGG
GGFTIRNVAKCWCYESRVAVGKEIDEKICQHDCYEYYGPHYSNNVAPRIVENKNSKQTWD
EVRSKVLENINKMLCAPSVQFQERPPDTDFPEPAEDDYDAGRRSSKWVGASPENGY
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggaggccggagggatttcccttagttctggatcagatgggatagggagaaaaatatct
tactcttatgatccagatgtgggaacttattactctggacatgggaatgctaggaagcct
cacctcatacgattgacacactctctttttgttgcatatggtttgtacaaggaaatggaa
gttgttaggccctgtcatgcaggagatagagatctaacaaagttacatgcatttttgagt
ggaatagctccagagacagtgcaggaccaagcccaagcattggaacggtttaatgttgga
ggtaactgtccagcttttaatgggttgtatcgatactgtcaaacatatgccagtggctct
attggctgtgccgcgagacttaatttcaaactatgtgacattgccagaggtcatagtcat
gctaaaaaatgtgaggcatctggattttgctatgtaaatgacatttttctgtccattctg
gagctattgaaatatcagaagagtgttttgtatgttgatattgacgttcaccatggtgat
ggagtcgagaaggccttttacacaactgatagggtcacgactgtctctctacacaaattt
ggagactacttccctggttcaggtcatatccaaaacattggatatgggaaaggaaaatat
tatgcccttaatgttcccttgaatgatggaattgacgatgaaaatttaaagtctatattt
aaatccattcttcaacaagtgatgattgtctatgatcctgaggcagttgtacttcagtgt
ggagctaattccttggctggagacagactaggctattttaagctttctgtgaaagggcat
gcagaatgtatactacgatacatgaggtcgttcaatgttccacgtttgctcttgggtggt
ggtggattcacaatccgtaatgttgctaaatgctggtgttatgagtcaagagttgcagtt
ggtaaagagattgatgagaaaatatgccagcatgattgttatgagtattatggaccacat
tatagtaataatgtggctccaagaattgtggaaaacaaaaactcaaaacagacgtgggat
gaagttaggtccaaagttcttgagaatattaataaaatgctatgtgcgccaagtgtccaa
tttcaagagcgccctccagatactgatttccctgagccggcagaagatgattatgatgcg
ggccgtagaagtagtaaatgggtcggagcaagtccagagaatggttactga

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