KEGG   Cryptomeria japonica (Japanese cedar): 131071742
Entry
131071742         CDS       T10556                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03082  ATP-dependent chromatin remodeling
cjf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131071742
   03083 Polycomb repressive complex
    131071742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjf03036]
    131071742
Enzymes [BR:cjf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131071742
Chromosome and associated proteins [BR:cjf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131071742
   HDAC complexes
    Sin3A-HDAC complex
     131071742
    BRAF-HDAC complex
     131071742
    REST complex
     131071742
    SHIP complex
     131071742
    MiDAC complex
     131071742
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131071742
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131071742
  Chromatin remodeling factors
   NuRD complex
    131071742
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131071742
NCBI-ProteinID: XP_057863673
LinkDB
Position
8:608347565..608350770
AA seq 439 aa
MVIQFSLIMDICMDCYGSSAEQELLQDQMGIPFESGGNSLSSGSDGTKRKVSLFFDPEVG
YFDYGNGNAMRPYRIRMTQNLVGAYGLHKEMEIVKPYPARYRDLISFHREDYVAFLKGIT
PDTMQDEAEALERFNIGGYSPVFDGLYHYCRTYAGASIGCAVKLNYKHCDIAINWGGGHS
HPRKCEASGFGYINDIVLSILELLKYHKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK
FGHNYFPGSGEIESIGYEKGKYYSVNVPLRDGIDDESFQSLFKPIIQQVMTVYDPEAVVL
QCGADSLAGDKLGRFNLSVKGHAECVRYMRSFNVPLMLLGGGGFTIHNVAKCWCYETAVA
VGKEIDEKIPEDFEDYKDYAPDYSINVAPCVMVNKNSKRFLDKIRSKVLENINKMPCAPS
VQFQERPPDTHFPEPEEDD
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggtcattcagttttcactcattatggatatttgcatggactgttatggcagctctgca
gagcaggagttattgcaggatcagatgggaattccatttgagagtggagggaattccctt
agttctggatcagacgggactaagaggaaagtatcattattttttgacccagaagtggga
tattttgactatggaaatgggaatgctatgaggccttaccgcataagaatgacacaaaat
cttgttggtgcatatggtttgcacaaggaaatggaaattgttaagccctatcctgcaaga
tatagagatctaattagtttccacagagaggactatgtagcatttttgaaaggaataact
ccagacacaatgcaggacgaagccgaagcattggaacgatttaatattggaggttactct
ccagtttttgatgggttgtatcattactgccgaacatatgctggtgcctctattgggtgt
gctgtcaaacttaattacaaacattgtgacattgcaattaattggggcggaggtcatagt
catcccagaaaatgtgaggcatctggatttggctatataaatgacattgttctgtccatt
ctggagctactgaaatatcacaagcgtgttttgtatattgatattgacgttcaccatggt
gatggagtcgaggaggccttttacacaactgatagggtcatgactgtctcttttcacaaa
tttggacacaactatttccctggttcaggtgaaatcgaaagcattggatatgaaaaagga
aaatattattccgtaaatgtccccttgcgtgatggaattgatgatgaaagttttcagtct
ttatttaaacccatcattcagcaagtgatgactgtctatgatcctgaggcagttgtactt
cagtgtggagctgattccttggctggagacaaactaggccgttttaatctttctgtaaaa
gggcatgcagagtgtgtacgctacatgaggtcattcaatgtaccacttatgctcttgggt
ggtggaggattcacaattcataatgttgctaaatgttggtgttatgagacagcagttgca
gttggtaaagagattgatgagaaaatacctgaggattttgaggattataaagattatgca
ccagattatagtattaatgtggctccatgcgttatggtaaacaaaaactcaaagcggttt
ttggataaaattaggtccaaagttcttgagaatattaataaaatgccatgtgcaccgagt
gtccaatttcaagagcgccctccagatactcatttccctgagccggaagaagatgattaa

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