KEGG   Cryptomeria japonica (Japanese cedar): 131072104
Entry
131072104         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131072104
  KO
K15361  WD repeat-containing protein 48
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    131072104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131072104
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     131072104
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_SPT8 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_DCAF12 RAWUL WD40_RFWD3 Beta-prop_Aladin
Other DBs
NCBI-GeneID: 131072104
NCBI-ProteinID: XP_057864146
LinkDB
Position
11:complement(729799030..729924238)
AA seq 763 aa
MHRVGSTGNTSNSTRPRKERRLTYVLNDANDARHCSGINCLAISQSSLPGSNDLLFSGSR
DGTLKRWELAEGSAVCHATFESHVDWVNDAVLTGETLVSCSSDTTLKTWDPFSDGVCTRT
FRQHSDYVTCLAAASKNSNIVASGGLGREVFIWDIEAALTPISRTFESMDDDNSNGVLSS
GNSVLTSTTGRVTNVTNNATSLHMSQMQGYSPIAAKGHKESVYALAMNDVGNLLVSGGTE
KVVRVWDPRTGAKQMKLRGHSDNVRALILDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYA
VHTDSVWTLASTPNFSHVYSGGRDLSLYLTDLTTRESLLLCMEKHPLLRLVLQDDWIWVA
TTDSSIHKWPAEVRNPHKIFQKGGAFLAGNLSFTRARACLEGSSLVPVYTQPSYVIPGSA
GIVQHEILNNRRQVLTKDAEGTVKLWEITRGAVIQDYGKVSFEEKKEELFEMVSIPAWFT
MDTRLGSMSLHLDTPQCFSAEMYAVDLNVPGSSEEQKINLAQETLHGLLAHWLSRRRQKM
STQTSNGDIAPGQETALRNHISHRIDHDDAENHNSGVLPAFEFSTISPPSIITEGTHGGP
WRKKITELDGTEDEKDLPWWCIECVLHGRLPPRDSAKCSFYLHPYEGTTVQVSSNGKLSA
PRILRIQKVINYVIEKMVLDRPLDTSNPETFTPVLSGSQSHVAAIGDGSLRSGMRIWQPK
AKPMVEILCNNQVLSPDMSLATVRAYIWKKPDDLFLHYRLVQK
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcaccgggtgggaagtacagggaatacttcaaactctacccgtcctcggaaagaaagg
cggctgacttatgttttaaatgatgcaaatgatgctagacattgttctggaataaattgc
ctggctatatcacagtcatcactgcctggtagcaatgacttattgttcagtggtagtcga
gatgggacacttaaacgatgggagttggctgaaggttctgctgtctgtcatgcaacattt
gaatcccatgttgactgggtaaatgatgcagtcctcacaggggagacacttgtttcttgt
tcttcggataccactcttaagacatgggatcctttctcagatggtgtttgtaccagaaca
tttcgtcaacactcagattatgttacatgccttgcagcagcatcaaagaatagcaatatt
gttgcttcaggaggtcttggtcgtgaggtattcatatgggatattgaagcagccttgact
ccaatctcacggacctttgaatcaatggatgatgataattccaatggtgttctcagttct
ggaaattctgttttgactagtacgacaggtcgagttacaaatgtcaccaacaatgccact
tccttgcatatgtcacagatgcaggggtacagtccaattgcagctaaaggacacaaggaa
tcagtgtatgcattggctatgaatgatgtgggtaacttgctcgtctctggaggaactgag
aaggtagtgcgggtgtgggacccaagaactggagcaaaacaaatgaaactcagggggcac
agtgacaatgtgcgagctctgattttggattccactggcaggttctgcttatctggatca
tcagattctatgatacggctctgggatcttggtcagcagcgttgtgtacattcatatgct
gtgcatactgactctgtttggacgcttgcaagtacaccaaattttagtcatgtgtacagt
ggtgggagagacctatcgttatacctcacagatttaacaacaagagagagtttgctgctt
tgtatggagaagcatcctcttctacgattggtgctacaggatgactggatatgggttgcc
acaacagattcttctatacataaatggccagctgaggtacgcaatccacataagattttt
caaaagggtggagctttcctggcaggaaatttatcctttacaagggcaagggcatgttta
gaaggatcatcacttgttcccgtgtacacacaaccttcatatgtcataccaggctctgct
ggaattgtacagcatgaaatattgaacaacaggcggcaggttttgactaaggatgctgaa
gggacagttaaactatgggagattaccagaggtgcagtcattcaggattatggaaaggtt
tcttttgaggagaaaaaggaggaattatttgaaatggtcagcattcctgcttggttcaca
atggataccagacttggtagtatgtctctccatttggacaccccccagtgtttttctgct
gaaatgtatgcagttgacttaaatgtgccaggatcctcagaggagcagaagataaatctt
gctcaggagacactacatgggctcttggcccattggctatcaaggagacggcagaagatg
tcaacacaaacttctaatggggatattgcaccagggcaggaaactgcccttagaaatcac
atttctcatagaatagatcatgatgatgccgaaaaccataattctggagttcttccagct
tttgagttttctactatttcacccccatctataatcactgaaggtactcatggaggtcca
tggcgcaagaagataactgagttagatgggacagaggatgagaaggatcttccatggtgg
tgcatagaatgcgtgttgcacggtcgacttcctcctagagacagtgcaaagtgtagcttt
tatttacatccatatgagggaacaacagtgcaagtgagcagtaacggaaaactcagtgca
cccaggatattgcgtattcaaaaagtcataaattacgtgatagaaaaaatggtacttgat
agacctttggatactagcaatccagagacatttactccagttttgagcggtagtcagtca
catgtagcagcaattggagatggctctcttagatctggcatgagaatttggcagccaaaa
gcgaagccaatggtggaaatcctttgcaacaatcaggtgctttcaccagatatgagtttg
gctacagtgcgagcatatatctggaagaaaccagatgatttgttccttcattacagactt
gtgcagaaatag

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