Cryptomeria japonica (Japanese cedar): 131072454
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Entry
131072454 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131072454
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131072454
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131072454
MMR (mismatch excision repair)
131072454
DSBR (double strand breaks repair)
HR (homologous recombination)
131072454
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131072454
NCBI-ProteinID:
XP_057864606
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Position
11:300386687..300387928
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AA seq
413 aa
AA seq
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MTKNGHVFSFDIVDCDGSEIRITCFDEIAKLHSNHVDIGSHYIVSKGFVKEANARYNKLN
SHLEIMLSDTSILKCYTNEEQPDQQSPPFMPIIELFHLTNNTLVDIIGLVLYVGDIIPIH
RKDGSQTQKCLVKINDLSGSTIDINLWGPMAEQKGLELKNMLTNDSLLILALRNAHVGYL
DGKLINITAVTTLHINPSFPEVELLTLRGKDHLLVVPFVAQTIHIDGRYTRMTISSIREQ
MSIKPKTIQTTLLVVLRFVNVNDQNFYYAACPLIVNGRPCKKKCTQHADDSWFCSRCQMS
MQDCNYSYLLPLKLQDATGTLWATAFDEGGIHLLHKTAKQLYALQNDATTIDTPSSVIKR
LLSCYYSFTVLVSTKTYNSETKMKVIVNKVAPVDFKAECHALLAKIACLSTET
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaatggccatgtgtttagctttgacattgttgattgtgatggttctgaaatt
agaattacatgttttgatgagatagctaagttacactctaaccatgtggacataggttca
cattatattgtttcaaaaggatttgttaaggaagcaaatgcaaggtacaacaaactaaat
agccatttagaaatcatgttgtctgatacatccatactaaaatgctacaccaacgaagaa
caaccagatcaacaaagtcctcctttcatgcccattattgaattgtttcatctaacaaat
aacacactggttgacataattggtcttgttctatatgttggagatatcattcctatacac
aggaaagatggcagtcaaacacaaaaatgtttggtgaaaattaatgatctatctggttca
acaattgacatcaacttatggggtccaatggcagaacaaaagggactagaattgaaaaat
atgttgaccaatgatagtctgcttatccttgctttacgtaatgctcatgttggctattta
gatggaaagcttataaacataacagctgtaacaacattacatatcaacccaagttttcca
gaagtagagcttctaacattaagaggaaaggaccatttgctagttgtaccctttgttgca
caaactatccacatagatggcagatatactagaatgacaatttcttcaatccgtgagcag
atgagcatcaaaccaaaaacaattcagacaacattgctagttgttctgcgctttgtgaat
gtcaatgaccaaaatttctattacgcagcttgcccactaatagtcaatggaaggccttgc
aagaaaaaatgtacacaacatgctgatgattcttggttctgctctagatgtcaaatgagt
atgcaagactgtaattatagttacctcttgcctctaaagttgcaagatgccacaggtact
ctatgggccactgcatttgatgagggtggcattcacttgctacacaaaactgcaaaacag
ctctatgcactacaaaatgatgcaacaacaatagatacaccttcttcagtgatcaagaga
ctactgtcgtgttactattcattcacagtgctagtttctactaagacatataattcagaa
accaagatgaaagtgatagtcaataaagttgctcctgttgacttcaaagctgagtgccat
gcattacttgcaaaaattgcttgcctaagtacagagacttaa
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