Cryptomeria japonica (Japanese cedar): 131072564
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Entry
131072564 CDS
T10556
Name
(RefSeq) multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b isoform X1
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131072564
Enzymes [BR:
cjf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
131072564
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
131072564
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
131072564
NCBI-ProteinID:
XP_057864734
LinkDB
All DBs
Position
9:375739771..375987947
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AA seq
959 aa
AA seq
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MGEHKRGRTQRRHFRQGGGGREDVWKKPRPSQPWEPFVSHNLAFDEYYKEQGIIPEKEWD
EFLSMLQKPLPATFRINSSGQFADDILFQLENDFLASVNPEDIGGNVAEFVKPLPWYPDK
LAWHLNFSRMQLRKNQTLERIHEFLKQENEIGNITRQEAVSMVPALFLDLQSNHYVLDMC
AAPGSKTFQLLEMIHRPVKPGSLPEGMVVANDVDVQRCNLLIHQTKRMCSANLMVTNHEA
QNFPGCRLNNNSLSTNSVLERGSDVGSSKFNGDIKTVERRDLTFDRILCDVPCSGDGTIR
KAPDIWRKWNTGLGNGVHRLQVQIAMRGVALLKVGGKLIYSTCSLNPVEDEAVVAEVLRQ
SGGSMELLDMSMELPELKRHPGLKTWKVRDKGHWLTSYRHVIRSRKTTIVPSMFPSGKTW
DECNIPYARHENCQRDDINMETASENAVNEKDGNQISHKNNLSPKVVSTDGYVGPSNDEF
LPSEENSREDDDTEVEAEVTSLPLERCMRILPHDQDTGGFFIAVFQKVSPFSVKDMKSKE
PYRKQNYRSTQDFEEVVPGRTDVDVSVNESVSSDFDNTACSPKMKNDTVSQRDVEVTEMD
TLGGGGTSCLHLDASLKEIISSDFGNAACSLNMKNDTFSEQDVKVTELDTLGSTACLHSD
VVNAIESIPDDLGDGECRREICQIIGDSQKKENVETEDGKFTHVGKQTKKGKIQQQGRWR
GVDPVLLLTDEKAINSIVTFYGIDESFPLVGHLVTRNSDTVHVKRIYYVSTSVRDAIKLN
ISAGQQLKITSVGLKMFERQSAKEEDSLCAYRISSEGLPMLLPYLRKRILYASLVDFKLL
LSTRTLYFKTFQDPKFLTDTSNLSLGCCIVILRTVEADPSNFHLASNLGSSEKPNIAVGC
WKGRTNLSLMVSKLESEELLERIFFNYGKEMPEMPDDSISKDNCIEEAGETPNVSDNDE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacacaaacgagggcgcacgcagaggaggcatttccgccaaggaggaggaggc
cgagaggatgtttggaagaagccacggccttcacagccatgggaacccttcgtttctcac
aatttggctttcgacgagtactacaaggagcaaggtattatacctgaaaaggaatgggat
gaatttctttcgatgcttcaaaagcctcttccggcaacttttcgaataaattctagtggg
cagtttgctgatgatattcttttccagctggaaaatgattttttagcatctgtcaatcct
gaggacataggtggcaatgttgctgaatttgtaaagcctttaccatggtatccagacaag
cttgcgtggcacttgaacttctctcggatgcagctaaggaaaaaccaaacacttgaaaga
attcatgaattcttgaagcaagagaatgaaatcgggaatataactcggcaggaggctgta
agcatggtaccagccctttttttggatttacaatcgaatcactatgttcttgacatgtgt
gcagcacctggatcaaaaacatttcaactgctagagatgattcacagaccagttaagcct
ggatcgttacctgagggaatggttgtagctaatgatgttgatgttcagaggtgcaatctt
cttattcatcagacaaagagaatgtgtagtgctaatttgatggttacaaatcacgaagca
caaaactttccaggatgccggttgaataataatagcttgtcgacaaattcagttcttgag
aggggatcagatgttggaagttccaagtttaatggagacatcaagacagtcgaaagaaga
gatttgacttttgatcgcatattatgtgatgtgccatgcagtggagatggcacaatacgc
aaggcacctgatatatggagaaaatggaacactgggcttggcaacggggtacatcgcctt
caagtgcaaattgctatgcgaggtgttgccttgcttaaagttggagggaaattgatttat
tccacctgctccttaaatccagttgaagatgaagctgttgttgcggaggttcttagacaa
agtgggggatcaatggagcttcttgacatgtctatggagcttccagagttgaaacgacat
cctggcttgaaaacttggaaggttcgtgataaaggacattggctaacttcttacagacat
gttattcgatccaggaaaactacaatagtacctagcatgtttccttctggtaaaacctgg
gatgaatgcaatatcccttatgctagacatgaaaattgtcagagagatgacatcaacatg
gaaacagcttcagaaaatgctgtgaatgagaaagatggtaaccaaatatctcacaagaac
aatctgtcccccaaagttgtgagcactgatggctacgtgggacccagcaatgatgaattt
ttgccttctgaagaaaatagtagagaggatgatgacactgaagtagaggcagaagttact
agccttcctttagaacggtgcatgaggattttgcctcatgatcaagatactggaggcttt
tttatcgctgtatttcaaaaggtttctcctttctctgtcaaggacatgaaatcaaaagaa
ccttatagaaagcagaattacagaagtacacaagattttgaagaagttgttccagggaga
actgatgttgatgtaagtgtaaatgaaagtgtctcatcagattttgataacacagcttgt
tcccctaaaatgaaaaacgacaccgtcagccaaagggatgttgaagtgacagagatggat
acattgggcggcggtggcacttcttgtcttcatttagatgcaagtttaaaagaaattatc
tcatcagattttggtaatgcagcttgttctcttaacatgaaaaatgacaccttcagtgaa
caggatgtgaaagtgacagaattagatacattgggtagcacggcttgtcttcattccgat
gtagtgaatgctattgaatcaatcccagatgatcttggagatggtgaatgtaggagagaa
atttgccaaattattggagatagccagaagaaagaaaatgtagagactgaagatggaaag
tttactcatgttggaaagcagactaaaaagggaaagattcagcagcagggaaggtggcga
ggagttgatcctgttttacttcttactgatgagaaggcaatcaatagcatagtcacattt
tatggtattgatgagtcatttccgctggtgggacatttagtcacacgcaatagtgacact
gttcatgtcaaaaggatctactatgtatcaacatctgtacgtgatgcaattaaattgaat
atttctgctggtcagcagctgaagataacttctgttggactaaagatgtttgaacggcag
tcagcaaaagaagaagactccctatgtgcttataggatatcgtcagaaggattgccaatg
cttcttccttatctgaggaaacgaattttgtatgcatcattagtagatttcaagcttctc
ttgtcaacccgaacattgtattttaaaacatttcaagatcccaagtttctcacagataca
tcaaatttatcactgggttgctgcatcgtcatactacgcacagttgaagcagatccaagc
aattttcatttggcatcaaatctaggttccagtgagaagcctaatattgcagtggggtgt
tggaagggaagaacaaatctgagtctcatggtatctaaattagaatctgaagagttactt
gaaaggatatttttcaactatggaaaagaaatgccagaaatgccagatgattcaatatcc
aaggataactgcattgaagaagctggagagaccccaaatgtttctgataatgatgaataa
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