Cryptomeria japonica (Japanese cedar): 131072696
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Entry
131072696 CDS
T10556
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
cjf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131072696
03015 mRNA surveillance pathway
131072696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131072696
03036 Chromosome and associated proteins [BR:
cjf03036
]
131072696
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131072696
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
131072696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
131072696
NCBI-ProteinID:
XP_057864920
LinkDB
All DBs
Position
9:381515187..381526285
Genome browser
AA seq
159 aa
AA seq
DB search
MADIQNRGARVGVPPPPPPPAAQPRGPPGPSRPPPLLVDREKTCPLLLRVFTKIGSHHTA
EDFAVRGKEPKDEVQIYTWRDATLRELTDLVKEVAPAARRRDAKLSFAFVYPDRRGRNVV
RQVGVTYAYPIARRPDDGNKALADLSFQTGDFLDVAILT
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatacagaacagaggtgcacgagtgggggttcctcctcctcctcctccgcct
gctgcgcagcctcgaggtccccccggcccttctcgccctcctccgctcctcgtcgatcgc
gaaaagacttgtccattgttgcttcgtgtattcacgaagattggaagtcatcatactgct
gaagactttgcagttagaggcaaggagccaaaagatgaagtgcaaatttatacctggagg
gatgctacacttcgagagctaacagatttggtaaaagaggtcgctccagcagcaaggaga
agagatgcaaagctatcatttgcgtttgtgtatcctgacagaagaggccgtaatgtggtt
aggcaggttggagtgacctatgcttacccaattgcaagacgaccagatgatggtaataag
gcgcttgcagatctaagctttcagacaggggatttcttagatgtggcaattctcacatga
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integrated database retrieval system
