Cryptomeria japonica (Japanese cedar): 131072786
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Entry
131072786 CDS
T10556
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131072786
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131072786
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF1565
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
131072786
NCBI-ProteinID:
XP_057865027
UniProt:
A0A1V1G0R7
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All DBs
Position
2:198934042..198936098
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AA seq
321 aa
AA seq
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MRSMARLGQNLHLKNLVFLALHLIIMAVEAQLLTASNRYLSGSTRSQGATLASNGGSFSV
ENYGAVGDGEHDDTEAFTGAWNEACKESPATLVVPSGKTFLVNNLDFQGPCQPGFTFQVD
GTIAAPEDPSSWKRNYVWLLYEHLQQFTLTGEGTIDGKGNNWWGKQKSRPAAIQFNDVKG
STLSGLKVTDSPQFHVTLTDCDSVQIVGITIQAPESSPNTDGIDTFVSTNIVIKDSTIGT
GDDCVGIGDGSSNIEISDITCGPGHGISIGSLGRGNAKEDVHSIHVVGAKLTSTTNGLRI
ETWPVLCVRVHFHSVLILLFP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaatggctcgactaggtcaaaatcttcatttgaagaatttggtatttttggcc
ttacatttgatcatcatggcagttgaagcccaactactcacagcaagcaacagatatctt
agcggttctacaagatctcagggtgctacactggctagtaatggaggaagctttagcgta
gaaaattatggtgcagtgggtgatggagaacacgacgatactgaggcgtttactggtgct
tggaatgaggcttgtaaagaatcccctgcaactttggttgtgccaagtggcaagactttt
ctggttaacaatctagatttccagggaccatgtcagcctggctttacttttcaggtcgat
ggaacgattgctgcacccgaagatcccagtagctggaaaagaaattatgtgtggttattg
tacgagcatcttcaacaatttactctcacaggggagggcactattgacggaaaaggaaat
aattggtggggaaaacagaaaagtagaccagcggccatacaattcaatgatgtgaaagga
agtacactcagtggactgaaggtgacagacagtcctcaatttcatgtcacattgacagat
tgtgacagtgtccagatcgtgggcattacaattcaggcaccagaaagcagcccaaacact
gatggaattgatacattcgtatccacaaacatagtcataaaagattccactattggaaca
ggagatgactgcgtggggataggtgatgggtcttcaaatatagagatcagtgatatcaca
tgcggtccaggccatggaataagtattggaagtctcggaagaggaaacgcgaaagaagat
gtccattcgattcatgtggtcggcgccaaattgacatcaacaacgaatggattgagaatc
gagacatggccggtattatgtgttagagtgcactttcattctgttctcattctgttgttt
ccgtga
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