Cryptomeria japonica (Japanese cedar): 131072828
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Entry
131072828 CDS
T10556
Name
(RefSeq) LOW QUALITY PROTEIN: pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131072828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjf02000
]
131072828
Transporters [BR:
cjf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131072828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA
AAA_29
AAA_18
AAA_25
AAA_16
SMC_N
AAA_22
AAA_33
AAA_30
RsgA_GTPase
AAA_28
NTPase_1
AAA_23
ABC2_membrane_3
Rad17
nSTAND3
NACHT
RuvB_N
AAA_17
TsaE
ABC_trans_N
AAA_5
AAA_11
AAA_7
cobW
RNA_helicase
SRP54
T2SSE
AAA_14
AAA_19
ATPase_2
DnaB_C
DO-GTPase1
TIP49
ABC_ATPase
SLFN-g3_helicase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
131072828
NCBI-ProteinID:
XP_057865091
LinkDB
All DBs
Position
5:200822724..200835076
Genome browser
AA seq
1361 aa
AA seq
DB search
MEAGRSVGESLECKTKEEELHNVRDSDHLLHGMRSRIDSRVGIELPQIEVRFKGLNVEAQ
VHVGRALPTIPNYILKMAKIFLRRFSLLCDSKRHLKILNNISGIIRPRRMTLLLGPPGSG
KTTLLLALANRLNTNVKVSGSVTYNGENVDKLMAQRLSSYVDQHDIHFGEMTVKETFAFA
LSCQGFGGQNKMLAEVSRREKEAGIIPDQDVDNFMKGLFQDTAFKTDYVIKSLCLDPCSN
MMIGDEMRRGISGGEKKRVTTGEILMGSATVLFMDNITTGLDSSTAFQILNYIRQSVQML
DMTAVLSLLQPTPEIFELFDDIILLSEGHIVYQGPLNHGLEFFASMGFHCPERKAVADFF
QEVTSKKDQQQYWAGEGQYRYVSVKEFAKAFHSFHVSKKLLVELRVPYDRRKSRSVSVTS
KYGATNIELFKACFSRECLLFKRNAFIHIFRTIQLSLVALVTMTVFCRTRMQHKTIIDGN
TYLGALYFSLMVILFNGFSELAMTIDRLPVLYKQRDLRFYPTWIYSICSWLLSIPMSLVE
TSIWVLMIYYVIGFNPQVSRLFRQFLLYFCVNQFGLALLHLLASLGQTMVVAFTYGSFSM
VVIFFLGGFILSREDINRWWIWGYWTSPLSYAQNAIAVNEFLGQRWDEPVGNGLNQTLGE
LVLTSRGIFPHYCWYWIGIGALLGYSILCNVLYTGALAILKPPGKVQSVVSEEAMQEMYA
NTTGEDDLPISKGPEAAMTSPAPLLKEKQGMVLPFKPLSLCFKHISYYIGMPEKKKQEGF
AADRLRLLHDVSGAFRPGILTAFVGVSGAGKTTLMDVLAGRKSCGYIEGSITISXYPKKQ
EQFARISGYCEQDDIHSPHVTVYETLIYSAWLRLPAEIDEETRKMFVEEVMELVELCPLR
NSLVGLPGVTGLSGEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVDT
GRTIVCTIHQPSIDIFEAFDELLFMKQGGRLTYAGSLGSHCSQLLEYFQSIDGVRKIEKG
VNPATWMLEITSPAEEVRLGIDFAEIYQKSSLFQENMALIESLSTPLGDSEDLHFPTQYS
QPFHKQFIACLWKQHWSYWRNSQYTAVRFFFTVSISLLFGSICWGLGSKRSEQQDLLNAL
GSMFASVLFIGVTNEMTVQPVAWLERMVFYRERAAGMYSALPYALAQVTIEIPHVFTQAL
LYSSVVYSMAAFEWTVVKFLWHFFFLYFTFLSYTFSGMMAVALTANNKIASVVSVPVLML
WILFSGAMISRTRCPPWWRWFFSTNPMAWCLYGLIGSQYGDVGTSLMMADGTEMSVKHFV
EENFGYHRQHLASVGFLTAGFSVLFGLVFVLGIKLFNFQKR
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggtagatctgtcggagaaagtttggaatgtaaaaccaaggaggaggagctt
cacaatgttagggacagtgaccatttgctccatggaatgcgaagcagaattgatagcaga
gtggggatagagttgccccaaattgaggtccgtttcaagggtttgaacgtggaagcacaa
gtacatgttgggagggctctaccaactatacccaactatattcttaaaatggccaagatt
tttttaaggagattttcacttttgtgcgatagcaaaaggcacctgaagattctgaataac
attagcggcattatcagaccccgcagaatgactttgctcctcggaccgccagggtcgggg
aagacaactttactcttggctcttgcaaataggcttaacacaaacgtcaaggtatctgga
agtgtgacatacaatggcgaaaatgtggataaattgatggctcagagactatcatcttac
gttgaccaacatgacattcattttggagaaatgactgtgaaagaaacctttgcctttgct
cttagttgccagggttttggtggccaaaacaagatgcttgcagaagtctcgaggagagag
aaagaagccggtatcatacctgaccaagatgttgacaactttatgaagggtctgtttcaa
gacacagccttcaagactgactacgtaatcaagagtctctgcctggatccttgctcaaat
atgatgatcggtgatgaaatgcgacgaggaatttcaggaggagaaaagaagcgtgtgact
acaggagagattctcatgggttcagcaacggttttgttcatggataacataacgacgggg
ttagatagttctacagcatttcaaattctcaactacatacgccaatcagtgcagatgctg
gatatgactgctgttctgtcactcttgcagccaactccagaaatattcgaattgttcgat
gacattattttgctttccgaaggtcacattgtgtatcagggtcctttgaatcatggatta
gaattcttcgcatccatgggtttccactgtccagagagaaaagcggttgcagattttttt
caagaagtgacatcaaaaaaggatcagcaacagtattgggcaggcgaaggacaatataga
tatgtttctgttaaggaatttgccaaggcgttccactcatttcatgtaagcaaaaaatta
ctcgtggagttgagagttccatatgatagaagaaagagtcgttctgtgtctgttacatcc
aagtatggtgctaccaatatagaattattcaaggcttgtttttcaagggaatgtcttctt
ttcaagagaaatgcattcattcacattttcagaacaatacagctgagtcttgtggctctt
gtcaccatgacagttttttgtcggacaaggatgcaacataaaacaattattgatggaaac
acttaccttggtgcactctacttcagtcttatggtcatcttgtttaacgggttttcagaa
cttgcaatgacaatagatagacttccagttctatacaaacaaagagatctaaggttctat
ccaacttggatatattcaatatgcagttggctgctgagcattcccatgtcattggtagag
acttccatttgggtactcatgatatactatgtaattggttttaatcctcaagtttcaagg
ttatttcgccaatttctactttatttttgcgtaaaccagtttggtttggcactgttacat
ctactagcttctttgggtcaaacgatggtagttgcctttacctatggctcgttttccatg
gtggtcatctttttcctaggtggttttatcctatccagagaggatattaacaggtggtgg
atttgggggtactggacttctccactatcgtacgctcaaaatgctattgctgtgaatgaa
tttttgggacagagatgggatgagcctgtagggaatggcttaaaccaaactttaggggaa
cttgtgttgacatctcgtgggatatttccacattattgttggtactggattggcattgga
gctctattgggatattctatcctatgtaatgtcttgtatactggagctttagccatcctc
aaacctcctggaaaagtccaatctgtggtttctgaagaagccatgcaggagatgtatgca
aacacaacaggagaagatgatttgccaatttctaaaggacccgaggcagctatgacgagc
cctgctcccttactaaaagaaaaacagggcatggtacttccattcaagcctttgtctctc
tgcttcaaacacattagttattacattggtatgcctgagaaaaagaaacaagagggtttt
gcagcagatcggttgaggctattacatgatgtgagtggagcattccgaccgggcattctt
acagcttttgttggagttagcggtgcaggcaaaactaccttgatggatgtcttggctgga
agaaaatcttgcggttacattgagggcagcattactatatcangctatcctaagaagcaa
gaacaatttgctcggatctcaggatactgtgaacaagatgacattcattcaccacatgta
actgtttatgaaacccttatttactctgcctggcttcgtttaccagctgaaatagatgaa
gaaacaagaaagatgtttgtggaggaggtgatggaacttgtggagttatgccccttgaga
aattctctcgtgggtctcccaggagtgactggtttgtcaggagagcagcgtaaaagattg
actattgctgtggagcttgttgcaaatccttcaattgtgttcatggatgaacccacgtca
ggactggatgcacggtctgcagccattgtcatgcgaacagtaagaaatattgttgacact
ggacgcacaattgtttgtaccatccatcagccgagcatcgatatttttgaagcttttgac
gagcttctcttcatgaaacaaggaggccggctcacatacgcaggatcattaggttcgcat
tgtagccaactcttggagtactttcagtctattgatggggttcgaaaaattgagaaaggg
gttaatccggcaacatggatgttggagataacctccccggcagaggaagttcgacttggg
attgattttgctgaaatctatcagaaatcatcgttgtttcaagaaaacatggccctaata
gaaagcttgagcactccccttggagattcagaagacctccatttccctacacagtactct
caacctttccataagcaattcatagcctgcttgtggaagcagcactggtcttattggcgg
aattctcaatacacagcagtgcgctttttcttcacagtttcgatctcgttgctttttggt
tccatttgctggggtcttggctcaaagagaagtgagcagcaggatttattgaatgctcta
ggttccatgtttgcatctgtactctttatcggagtaacaaatgaaatgactgtgcaacct
gttgcttggcttgaaaggatggtcttctaccgtgagagggccgctggaatgtattcagca
ctaccttatgcattggctcaggtaacaattgagattccgcatgtgttcactcaagcactc
ctgtacagctctgtggtgtattccatggcggcctttgagtggacggtggtgaaatttttg
tggcatttcttctttttgtatttcaccttcctcagctacacattctctggaatgatggcc
gtagcacttactgccaacaataaaatagcttcagttgtttcagtgcctgtgctgatgttg
tggatcctcttctcaggcgccatgatttctcgtacgaggtgtcctccatggtggagatgg
tttttcagcacgaatccaatggcatggtgcctctatggtctcattggttcgcaatacgga
gacgttgggacgagtctaatgatggcagatgggacagaaatgtctgtgaagcattttgtg
gaggagaattttggttatcatcgacagcatttggccagtgtgggatttctgactgcagga
ttttctgttttgtttggccttgtatttgtcttgggaatcaagcttttcaatttccaaaag
cggtaa
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integrated database retrieval system
