Cryptomeria japonica (Japanese cedar): 131073075
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Entry
131073075 CDS
T10556
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00280
Valine, leucine and isoleucine degradation
cjf01100
Metabolic pathways
Module
cjf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
131073075
Enzymes [BR:
cjf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
131073075
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
MCCA_BT
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_ST
Biotin_lipoyl_2
GARS_A
BT_MCC_alpha
ATP-grasp_3
ATP-grasp_4
ATP-grasp_IQCH
Motif
Other DBs
NCBI-GeneID:
131073075
NCBI-ProteinID:
XP_057865454
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All DBs
Position
3:913892689..913896820
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AA seq
723 aa
AA seq
DB search
MGIARLVAKHLSSKKIQTINRLYSSTSSSIEKILIANRGEIACRVIGTARRLGIKTVAVY
SEADRNALHVNLADEAVYIGPAAARASYLNAGAILQAARRTGAQAVHPGYGFLSESAPFA
ELCEKEGLKFIGPPASAIRDMGDKSASKRIMSQAGVPVVPGYHAAEQDPELLRSEAQRIG
YPVLIKPTHGGGGKGMHIVSAPEEFLDSLHAAQREAAASFGNEAVLLEKYIARPRHIEVQ
IFGDRLGNAVHLYERDCSVQRRHQKIIEEAPAPNVSEELRRHLGEAAVSAAKAVGYYSAG
TVEFIMDTQSDEFFFLEMNTRLQVEHPVTEMVIGQDLVEWQIRVANGEPLPLGQSQISCT
GHAFEARIYAENIPKGFLPATGVLNHYCPPAVSPTVRVETGVREKDTVSMHYDPMIAKLV
VWGKSRDAALVKLKDCLSDFQVAGLPTNISFLQGLARHWAFASGQVETHFIQHFNDDLFN
VELVKTELDSAKFGGALAAACICMREQAEDGSSSLWHAAPAFRINNELKRGFELKWKSET
VDMEWVPVGILVTYKKDGTFYVEIEDGDFLGIRVRGDDVAGIKEGKLKLHVDGLSMNASL
AVYLKDSIEHIHIWYGNHHHHFTQDIPMRHQSEEDLMGQQNKLSDTFTTSVKGAVIAPMA
GCIVKILVEEGKMVGKEQAILVLEAMKMEHVVRSPQQGYVRQLQFGVGQQVFDNSVLFVI
EDK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgcaagacttgttgcaaaacatctttcatcaaagaaaattcagacaataaac
aggctctacagctcaacctcatcgagtatcgaaaaaattctgatagcaaacagaggcgaa
attgcctgccgtgtgataggaacagccaggcggttgggaataaagactgtggctgtgtac
agtgaagctgacaggaatgccctacatgtaaacctagcagatgaggctgtttacattggc
cccgcggccgcccgggccagctacctcaatgcaggggcaattctccaggcagcccggcgc
acaggtgctcaggctgtacaccccggctatggctttctctctgagagtgccccctttgca
gagttatgtgaaaaggagggcctcaagttcattgggccaccagcctcggcgatccgagac
atgggggacaagagcgcctccaagagaattatgagccaagctggggttccggtcgtgccc
ggctaccacgcagccgagcaggaccctgagcttctcaggtccgaagcccagagaattggc
tacccggtgttaatcaagcctacgcacggtggaggtgggaagggaatgcacattgtctca
gccccggaggaatttttggactctttacatgctgcccagcgagaggctgctgcatccttt
ggcaatgaagctgtgcttttggaaaaatacattgcccgccctcggcacattgaagtgcag
atttttggagaccggctagggaatgctgtgcatttgtatgagagggattgcagtgtacag
aggaggcatcaaaagataattgaagaggctcctgcacctaatgtttcagaggagcttcgg
cgccatttgggagaagcagcggtatctgctgccaaggcagtggggtattatagtgctggt
actgtggaattcataatggatactcaatctgatgaattctttttcttggagatgaacacc
cgacttcaggtggaacaccctgtaacagaaatggtaataggccaagaccttgtggagtgg
cagattcgagttgcaaatggggagccccttccacttgggcagtcccagatttcctgtact
gggcatgccttcgaggctcgaatctatgctgaaaatattcccaagggatttttgcctgca
acaggtgttttgaatcattactgcccccctgcagtttccccaaccgtgagggttgagact
ggcgttagggaaaaggatactgtaagcatgcattatgatcctatgatagcaaaactagta
gtctgggggaagagccgggatgcagctttggttaaactcaaggactgcctgtctgacttc
caggttgctggcttaccaacaaacatttctttcctccagggacttgccaggcactgggca
tttgctagtggtcaggttgagacccactttatacagcacttcaatgatgatctctttaat
gttgaattggtaaaaactgagttggatagtgctaaatttggtggagcactggctgctgct
tgtatctgcatgagggaacaagccgaggatgggtcatcttcactttggcatgctgctcca
gcattccgcatcaacaatgaattgaagcgtggatttgaactgaaatggaagagtgaaacc
gttgatatggagtgggtacctgtgggaattcttgtaacgtataagaaagatggcacattc
tatgtggagattgaagatggagactttcttggcattagagtgagaggggatgatgttgca
ggtatcaaggaaggaaagttgaagctgcatgttgatgggcttagcatgaatgcgagtttg
gcagtgtatttaaaggactccattgaacacatacacatttggtatggtaaccatcaccat
cattttactcaagatataccaatgagacaccagtctgaagaggatcttatgggtcaacaa
aataagttatctgatacattcactactagtgtaaaaggagcagtgattgcacccatggca
ggatgcattgtgaagattcttgtagaagaggggaaaatggttggcaaggaacaagccata
ctggttttagaagccatgaaaatggagcatgttgtaagatcaccacagcaaggttatgtt
cgacaattacagtttggtgttgggcagcaggtttttgacaattctgttctctttgttatt
gaggacaaataa
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